| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1245 |
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| Symbol | |
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| ID | 4664536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1522845 |
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| End bp | 1524545 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639819476 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_966691 |
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| Protein GI | 120602291 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.11159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCT GCAAAGCCAA GACAGCTCCG GGTGTGCCCG TCACGCCACA GAGCAGCTAT
ACCGGCCCCA TCACCATCGA CCCTGTGACC CGAATCGAAG GCCACCTTCG CATCGAAGTC
GAGGTCGAAA ACGGCAAGGT GAAGCGCGCA TACAGCAGTT CGACGCTCTT CAGGGGGCTT
GAGATCATCC TGAAGGGACG CGACCCGCGC GATGCGCAGC ACTTCACTCA GCGCACCTGC
GGCGTGTGCA CCTACACGCA TGCGCTGGCT TCCACGCGCT GCGTCGACAA CGCGGTGGGT
GTGCATATCC CCAAGAATGC CACATACATC CGCAACCTCG TTCTGGGTGC GCAGTATCTG
CACGACCACA TCGTGCACTT CTACCACCTG CACGCGCTCG ACTTCGTCGA CGTGACCAAC
GCCCTCAAGG CCGACCCGGC CAAGGCTGCG AAGATCGCGT CATCCATATC GCCCCGCAAG
ACAACGGCGG CCGACCTCAA GGCCGTACAG GACAAGCTCA AGGCGTTCGT GGCCAGCGGG
CAACTCGGCC CCTTCACCAA CGCCTACTTC CTCGGCGGTC ACCCCGCCTA CTATCTCGAA
CCCGAACTCG ACCTCATCGC CACGGCCCAC TACCTCGAAG CCCTTCGGCT TCAGGTCAAG
GCCGCCCGCG CCATGGCCGT CTTCGGTGCC AAGAACCCGC ACACCCAGTT CACCGTGGTG
GGCGGGGTCA CCTGCTACGA CGCGCTCACG CCCAAGCGCA TCCAGGAATT CACCGACCTC
TGGAAAGAGA CGAAGGCCTT CGTCGATGAG GTGTACATCC CCGACCTGCT GGCGGTGGCA
TCGCGCTACA AGGACTGGAC ACAGTACGGT GGCACCACCA ACTTCATCAC CTTCGGCGAG
TTCCCCAAGG ACGAATACGA CCTGAACAGC CGTTTCTTCA GACCCGGCGC GGTGTTCAAG
CGCGACATCC AGAACATCAA GCCGTTCGAC CCCATGCAGA TTCGCGAACA CGTGCGGCAC
AGCTGGTACG AAGGTGCCGA AGCGCGCCAC CCGTGGAAGG GTGCGACCGA ACCCAAGTAC
ACCGACCTGC ACGGAGAGGA CCGCTACTCG TGGATGAAGG CCCCGCGCTA CATGGACGAA
CCCATGGAGA CCGGCCCCCT CGCGCAGGTG CTGGTGGCCT ATGCGCAGGG CCACAAGCAG
GTGAAGGCGG TCACCGACAC CGTACTCGGC GCTCTTGGCG TCGGTCCCGA AGCCCTGTTC
TCCACACTGG GACGCACGGC GGCGCGCGGC ATCGAGACCG CGGTCATCGC CGCCCAGATG
GAACAGTGGC TGAACGAGTA CAAGGACAAC ATCGCCAGCG GCGACAACAA GATCGTCGAG
CCATGGGAGA TGCCCAAGCA GGCTGAGGGT GTCGGCTTCG TCACCGCACC ACGCGGCGGC
CTCTCGCACT GGATACGCAT CGAGGACGGA CGCATCGGCA ACTTCCAGCT TGTCGTTCCC
TCGACGTGGA CGCTTGGCCC CCGCTGTGCG AACAACAAGC CCAGCCCCGT CGAAGAGGCA
CTGGTGGGAA CCCCGGTCGC GGACGCGAAG CGCCCCGTCG AGATTCTGCG CACCGTCCAC
TCCTTCGACC CGTGCATCGC CTGTGGCGTA CACGTCATCG ACTCGCAGAC CAACGAAGTA
CACAAGTTCC GCATCCTGTA G
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| Protein sequence | MGGCKAKTAP GVPVTPQSSY TGPITIDPVT RIEGHLRIEV EVENGKVKRA YSSSTLFRGL
EIILKGRDPR DAQHFTQRTC GVCTYTHALA STRCVDNAVG VHIPKNATYI RNLVLGAQYL
HDHIVHFYHL HALDFVDVTN ALKADPAKAA KIASSISPRK TTAADLKAVQ DKLKAFVASG
QLGPFTNAYF LGGHPAYYLE PELDLIATAH YLEALRLQVK AARAMAVFGA KNPHTQFTVV
GGVTCYDALT PKRIQEFTDL WKETKAFVDE VYIPDLLAVA SRYKDWTQYG GTTNFITFGE
FPKDEYDLNS RFFRPGAVFK RDIQNIKPFD PMQIREHVRH SWYEGAEARH PWKGATEPKY
TDLHGEDRYS WMKAPRYMDE PMETGPLAQV LVAYAQGHKQ VKAVTDTVLG ALGVGPEALF
STLGRTAARG IETAVIAAQM EQWLNEYKDN IASGDNKIVE PWEMPKQAEG VGFVTAPRGG
LSHWIRIEDG RIGNFQLVVP STWTLGPRCA NNKPSPVEEA LVGTPVADAK RPVEILRTVH
SFDPCIACGV HVIDSQTNEV HKFRIL
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