Gene Dvul_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1240 
SymbolileS 
ID4663467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1517537 
End bp1520353 
Gene Length2817 bp 
Protein Length938 aa 
Translation table11 
GC content64% 
IMG OID639819471 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_966686 
Protein GI120602286 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.227379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0730033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT ACAAGAAGAC GCTGCAACTG CCCGAAACCA AGTTCCCCAT GAAGGCGAAC 
CTGACCCAGC GCGAGCCGGA AATGCTGCGC AAATGGGAAA AGGACGACGC CTACGGAGCC
ATGGTCCGGG CATCGGGACA GCAGGGCACC TATGTGCTCC ACGACGGTCC TCCCTACGCC
AACGGCAACA TCCACATGGG CCATGCGCTC AACAAGATCC TGAAGGACAT CATCGTCAAG
TCGCGCAACC TTCAGGGCTT CAAGGCCGAA TACGTCCCCG GCTGGGACTG TCACGGCCTG
CCCATCGAAC TCAAGGTCGA ACACGAACTG GGCGAGAAGA AGCGCACCAT GCCCGCCCAT
GCCGTACGCA AGCGCTGCCG CCAGTACGCC GAAAAGTATC TCGACATCCA GCGCAAGGAA
TTCAAGCGCC TCGGCGTCTT CGGCGCATGG GACAAGCCAT ACGTCACCAT GCACCCTTCC
TATGAAGCGG CCACGGCACG CGAGCTTGGC AACTTCGCAG CCAAGGGCGG ACTCGTCCGC
AGCAAGAAGC CCATCTACTG GTGCTGTTCC TGCCAGACCG CCCTCGCCGA AGCCGAGGTC
GAGTATCACG ACCACACATC GCCCTCGGTG CACGTGCGCT TCCCGCTGCG TGACCCGCGC
GTGGCCGAAG TGCTGCCCGG CGTCGACCCT GCCCACGCCT ACATCGTCAT CTGGACGACG
ACGCCGTGGA CCCTGCCCGA CAACATGGCC GTGGCCGTCC ATCCCGATTT CGACTACGTG
GTCGTCCGCC ATGGAGGCGA CTTCCACATC GTCGCCGAAG GACTGCTTGA AGCCTGCCTC
AAGGCGTTCA AGTGGGACGA ACACGAGGTG GTCGCCCGCA TCGGCGGTCG CGCCCTCGAA
GGGCTCAAGG CGACCCACCC CTTCTACGAC CGCCCCTCGC CCATCGTGCT TGCCGACTAC
GTGACCCTTG AATCCGGTAC CGGCTGCGTT CACACGGCCC CCGGGCACGG TCGCGAAGAC
TATGAGACGG GCCTGCGCTA CGGCCTCGAC ATCTATTCTC CTCTCACCGA TGAAGGGCGC
TACCTCGATT GCGTGGAATT CTTCGCGGGC ATGACCATCT TCGAGGCAAA CCCCAAGGTC
ATCGAGAAGC TGCGTGAAGT GGGCAACCTG CTGGCCGAAG GCCGCATCAC CCACTCCTAC
CCGCACTGCT GGCGCTGCAA GAAGCCCGTC ATCTTCAGGG CCACCACCCA GTGGTTCATC
GCCATGGAAC GCAACGACCT GCGCCAGAAG GCCCTCGACG CCATCCGCGA CGACGTGCGC
TGGATTCCCT CATGGGGGCA GGAACGCATC CATAACATGA TCGAATTCCG CCCCGACTGG
TGCATCTCGC GTCAGCGCAT GTGGGGTGTG CCCATCGTTG CCCTTCTCTG CGAAGATTGC
GGCGAGGCGT GGAACGACGC CGACTGGATG CGCGACATCG CAGAGCGCTT CGCCAAGCAC
GCCACAGGGT GCGACTACTG GTACGAGACG GACCTCTCCG ACATCGTTCC CGCCGGTCTG
CGCTGCCCGA AGTGTGGCGG CGACCACTGG AAGAAGGAGA CGGACATCCT CGACGTATGG
TTCGACTCGG GCACCAGCTT CGCCGCCGTG GTCGAGCAGC GCGAAGAGTG CGGCTTCCCG
GCCGACCTCT ACCTTGAAGG TTCCGACCAG CATCGCGGCT GGTTCCACAG TTCGCTGCTC
GCCTCCATCG GCACCCGTGG CGTTCCGCCC TACCGTTCTG TCCTGACCCA TGGCTACGTG
GTGGACGGCG ACGGTCGCAA GATGTCCAAA TCGGTCGGCA ACGTGGTCGC ACCGCAGGAG
ATCATCGACA AGCACGGCGC CGAAGTGCTG CGCCTGTGGG TGGCATCCGT CGACTACCGC
GAAGACATCC GCATCTCCGA GGAGATCCTC AACCGGCTCG TGGACGCCTA CCGCCGCATC
CGTAACACCT GTCGTTACCT GCTCGGCAAC ATCAGCGACC TCACGCCCGA GACCATGGTC
CCCTTCGAAG CGATGGACCC GCTCGACCGC TTCGCCCTCG ACCTCGCCTC AAGGGCCCAC
GAGCGCATTC AGGACGCCTA CACGGAATAC GAGTTCCACA AGGTTTTCCA CACGCTGCAC
AACCTCTGCG TGACGGACCT CAGCGCCTTC TATCTCGACA TCCTCAAGGA CCGTCTCTAC
TCCTCCGCTG CCGACAGCCA CGCGCGGCGC TCGGCCCAGA CGGCCCTGTA CCGCATCCTC
ATGCTGATGG TCCGCGACAT GGCACCGGTG TTGAGCTTCA CCGCAGAAGA GGTGTTCGGC
TACGTGCCTG CCGCCCTGCG CCCTGATGTC ATCAGCGTCT TCGCGCTGCC CGCAACCGAT
GCCCCGGCCT TCACCCTCGA TACGACCTCC CGTGCTGCGT GGGAAAAACT GCTGGCCGTA
CGTTCCGAAA CGACCAAGGC CATCGAACCG CTACGCAAGT CGGGCGAGGT GGGACATTCT
CTCGACACCC ATGTGACCCT CTTCGCCGAC CCGTCGCTCA AGGCGACGCT GGAAGGCCTC
GGTAGCGACC TGCGCGCCAT GTTCATCGTG TCGCGCCTCG AGGTCATGAA CCTCGCCGAT
GCCCCCGCCG ACGCGTGGAC ATCCGAGGAA CTGCCCGAAC TCAGGGTCGC CGTCCGCAAG
GCCGAAGGCG AGAAGTGCGA ACGGTGCTGG ATCATCAGTG CCGACCTCGG CACCGATGCC
GCGCACCCCA CACTGTGCCC CCGCTGTACC GCAGTGCTCA CAGGCACCGG GGCCTAA
 
Protein sequence
MSDYKKTLQL PETKFPMKAN LTQREPEMLR KWEKDDAYGA MVRASGQQGT YVLHDGPPYA 
NGNIHMGHAL NKILKDIIVK SRNLQGFKAE YVPGWDCHGL PIELKVEHEL GEKKRTMPAH
AVRKRCRQYA EKYLDIQRKE FKRLGVFGAW DKPYVTMHPS YEAATARELG NFAAKGGLVR
SKKPIYWCCS CQTALAEAEV EYHDHTSPSV HVRFPLRDPR VAEVLPGVDP AHAYIVIWTT
TPWTLPDNMA VAVHPDFDYV VVRHGGDFHI VAEGLLEACL KAFKWDEHEV VARIGGRALE
GLKATHPFYD RPSPIVLADY VTLESGTGCV HTAPGHGRED YETGLRYGLD IYSPLTDEGR
YLDCVEFFAG MTIFEANPKV IEKLREVGNL LAEGRITHSY PHCWRCKKPV IFRATTQWFI
AMERNDLRQK ALDAIRDDVR WIPSWGQERI HNMIEFRPDW CISRQRMWGV PIVALLCEDC
GEAWNDADWM RDIAERFAKH ATGCDYWYET DLSDIVPAGL RCPKCGGDHW KKETDILDVW
FDSGTSFAAV VEQREECGFP ADLYLEGSDQ HRGWFHSSLL ASIGTRGVPP YRSVLTHGYV
VDGDGRKMSK SVGNVVAPQE IIDKHGAEVL RLWVASVDYR EDIRISEEIL NRLVDAYRRI
RNTCRYLLGN ISDLTPETMV PFEAMDPLDR FALDLASRAH ERIQDAYTEY EFHKVFHTLH
NLCVTDLSAF YLDILKDRLY SSAADSHARR SAQTALYRIL MLMVRDMAPV LSFTAEEVFG
YVPAALRPDV ISVFALPATD APAFTLDTTS RAAWEKLLAV RSETTKAIEP LRKSGEVGHS
LDTHVTLFAD PSLKATLEGL GSDLRAMFIV SRLEVMNLAD APADAWTSEE LPELRVAVRK
AEGEKCERCW IISADLGTDA AHPTLCPRCT AVLTGTGA