| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1232 |
|---|
| Symbol | |
|---|
| ID | 4663028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1511452 |
|---|
| End bp | 1512249 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639819464 |
|---|
| Product | phosphonate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_966679 |
|---|
| Protein GI | 120602279 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.917781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.196342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA TGAGTGCCTC GGCCATCAAA CGACCCTCAC CCTTCGAGGT GAACTGGTGG
GCGCGGGCAG GCTACCTGCT GGTGGCCCTC TACTGCGTCT ATGCCGTCAA CGCCCTCGAC
ATCTCGTTCG ATCGTATCAT CATCGGTCTC GACAACGGGG CGAAGTTCCT CGGCAGCATG
TTCCCACCGG TGTTCAAGCG GTGGGCATTG CTGATAGACA ACCTCATCGA GACGGTGCAG
ATAGCCATCA TTTCATCGGC CTTCGGTGTG GCCATCTCGT TGCCCGTCGG CCTGTGCGCC
GCGCGCAACC TCATGCCCGA CTGGCTCACA TGGCCCAGCC GTGCGTTCAT CGCCGTGTGC
CGCTCGTTCC ATCCGGTCAT CTTCGCCATT CTCTTCGTGA AGGCTGTCGG GTTCGGGCCT
CTTGCCGGCA TTCTCACACT CATCTTCGCT TCCATAGGCT TCGTCGCCAA GCTGTTCGCG
GAAGCTATCG AAGAGATTTC GCTCAAGCCG GTCGAGGCGA TGCGCGCTGC CGGTGCTCCG
TTCATGTCTG TGCTGGTCTA TTCGGTGCTG CCGCAGGTGC TCAACCGCTT CATCGGGTTC
GCCACCTACC AGACCGACGC CAACCTTCGT AACTCCACGA TGATCGGCAT CGTCGGTGCC
GGTGGCATCG GCGGTACGCT GGCAGCCGCC TTCCAGCGTT TCGACTACGG TTTCGTTTGT
GCCATCCTCA TCTCGATCAT CGCGCTCATC ATGGTTTCAG AGTTGCTTGC CCAGCGCGTT
AAGGGGGTCT TCCGATGA
|
|---|
| Protein sequence | MAAMSASAIK RPSPFEVNWW ARAGYLLVAL YCVYAVNALD ISFDRIIIGL DNGAKFLGSM
FPPVFKRWAL LIDNLIETVQ IAIISSAFGV AISLPVGLCA ARNLMPDWLT WPSRAFIAVC
RSFHPVIFAI LFVKAVGFGP LAGILTLIFA SIGFVAKLFA EAIEEISLKP VEAMRAAGAP
FMSVLVYSVL PQVLNRFIGF ATYQTDANLR NSTMIGIVGA GGIGGTLAAA FQRFDYGFVC
AILISIIALI MVSELLAQRV KGVFR
|
|---|
| |