Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1210 |
Symbol | |
ID | 4662582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1484475 |
End bp | 1486868 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639819442 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_966657 |
Protein GI | 120602257 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.489928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTATCC GCGAAGCATT ATTGGATGTC CTGAAAGGGC TGTTAAAGAC GACACCACGC GAAGAACCTC TGGCCGACAC GTCGGTGACA GAAGAAGGAA GGTCACGGAC GCAGCGCCCC GGCACCATGA GGCAACCGTG GGAAGAATCG CCTCTTGAGA TGTTACGGGC ATATGACGCG CTGCATATCG TCGTGCTTCG CCTTGTCGAC CACGCCCTGC TGCATGAACT CTACGGCAGT GAGCTTCTTT CGGGTGTCGA ACGCAGCATC GCCGCAAGCA TTGGTGAACA TCTGCCACAA TTGGGGCATC TCCCGGATGG CACGTTGCAA CTCTTTCCAG CGGAAGGTGG CGAATTCGTG GCTGTCTGGC CCGCACAGCG CCAGCGCACG AGACGCCTCG CCGACATCGC CTACACGCTC AAGCACTCCG TCCGCCATGC CGTGAAAGAC AGCCCGCTGC TGTGGTCGGG CCGCGACCTC CAGATAGACA CGGGTTGCGC CGTCTTCCGC AAACGTCCGG ACAGGCCGGT CGAAGATGAC TTTCTGCGTT CGCTAGACGA TGCGCGCATG ATGGCCCACC GCAACATGGA CCTCACCGAC CTGCGCATGG CCCGTGACTT CAAGACGATA CTTCAGGAGA ACGCCTTGCG CACACTCTAC CAGCCCATCG TCCACTTCCC CACGGGTCGC ATCATGGCCT GGGAGGCTCT CACCCGTGGG CCTGCCGATT CGCCCCTGCA TTCTCCGGCC ATGCTCTTCG ACGTGGCCGA GGAGATGGGT ATGCTCTTCG CCCTTGAGCG CAATTGCCGC GAACGTGCCA TCGCCGATGC CGGGACACTG GCCGCAGGGC AGAAGCTCTT TCTCAACATC CACCCCCGCA CGTTGTCCGA CCCCGAGTTC ACACCGGGCA GCACACTCCG TGCGTTACGT GACACGGGGT TGCGTCCCGA GGATGTCGTC TTCGAAATCA CCGAACGACA CGCCATCAAA GACCTGACCA CGTTCTACAA GACGCTGGAG CATTATCGCG GGCAGGGATT CGGCATCGCC ATCGACGACG CAGGCACAGG CTATTCCGGC CTCGCCAGCA TCGCCGAACT CAAACCCGAC TTCATCAAGA TAGACATGTC GCTGGTGCGA GGCATCCATC GCGACCCCGT CCGTCAGGCT CTCATCGAGA CGTTCATCGA CTTTGCGGAG AAAATCGGCG CACGGGTCAT CGCGGAGGGC ATCGAGTGCA GAGAAGAGGC GAGCATCCTG CTGCGGATGG GGGCGCACTA CGGGCAAGGG TACTACCTTG GGCGACCGTC GTACCCGAAG CACGAGGAGT ACATCGACCT CAGCGGACTG CGCCCCGCGC TGGATATCGG AACATCGGGC ATGGCGTGTT CCATGCCTGT GGGCGACCTT GCCGAGGAGG CACAGACCGT CGCGCCCGAC GCCCTCGTCG ACGACATCCG CAAGCGCTTC GAGGACGGAC AGCAGCATAA CGGACTTGCC GTGGTCGACG CCAACACCCA CCCCATGGGT CTGGTGATGG ACTACCACCT GAACCGCCAG CTTTCGGCGC AGTACGGAGT CGCTCTCTAT TCCAGAAGGG CTGTCACGTG CGTCATGGAC CCCGCACCGA CCATCCTCGA CGAGAGTACC CCTGCCGAAG AGGCCGCACG CATCGCCATG GCCCGCCCCC GGCTTCAGGC CTATGACGAC CTTCTGGTCA CACGCGAGGG AAGACTCACC GGTATCGTCC CCGTCCAGAA ACTGCTGCAC ACCATCGCAG AGGTGCAGGT CGAACTTGCA AAGGGCACGA ACCCCCTTTC GGGGCTTCCC GGCAACGTCG CCATCGAGAA GGAGATAGAG ACGCGGCTCG CCTCGGCACG GCGTTTCGCA CTCATCTACG CCGACCTCGA CAACTTCAAG AGCTACAACG ACACCTACGG ATTCAAGAAC GGGGACCGCA TCATCCTGCT ACTGGCGCGC ATTCTCGCAT GGGCCATACG GCGGCACGGG AGGAAGGGCG ACCTTGTAGG GCACATCGGC GGCGACGACT TCGTGTGCAT CACCACACCC GAACTCGCAT CCCGGGTCTG CAAGGGCATA ACCCGTTGTT TCGGCAGGCT CGTCCGCCAC TGCTATTCTG CCGAAGACAG AGAGCGGGGC TGGATAATGG CGCGAGGGCG TGATGGCGTG GAACGGAACT TCCCCCTCGT TTCGGTCTCA CTGGCTGTGC TCGACTGCGG TATGGAGAAC AACCTTCTGG AAATCGGAGA ACGGGCGGCC CATGTGAAAC ACCTGGCGAA AGCCATCGCG GGCAACGCCT ACGTCCTCGA GACCGGGAAC GTAGGCGGAA GCGGAGACTG CGTATGCCGC AGTGGTACGC AAAGTGCGTT TTGA
|
Protein sequence | MRIREALLDV LKGLLKTTPR EEPLADTSVT EEGRSRTQRP GTMRQPWEES PLEMLRAYDA LHIVVLRLVD HALLHELYGS ELLSGVERSI AASIGEHLPQ LGHLPDGTLQ LFPAEGGEFV AVWPAQRQRT RRLADIAYTL KHSVRHAVKD SPLLWSGRDL QIDTGCAVFR KRPDRPVEDD FLRSLDDARM MAHRNMDLTD LRMARDFKTI LQENALRTLY QPIVHFPTGR IMAWEALTRG PADSPLHSPA MLFDVAEEMG MLFALERNCR ERAIADAGTL AAGQKLFLNI HPRTLSDPEF TPGSTLRALR DTGLRPEDVV FEITERHAIK DLTTFYKTLE HYRGQGFGIA IDDAGTGYSG LASIAELKPD FIKIDMSLVR GIHRDPVRQA LIETFIDFAE KIGARVIAEG IECREEASIL LRMGAHYGQG YYLGRPSYPK HEEYIDLSGL RPALDIGTSG MACSMPVGDL AEEAQTVAPD ALVDDIRKRF EDGQQHNGLA VVDANTHPMG LVMDYHLNRQ LSAQYGVALY SRRAVTCVMD PAPTILDEST PAEEAARIAM ARPRLQAYDD LLVTREGRLT GIVPVQKLLH TIAEVQVELA KGTNPLSGLP GNVAIEKEIE TRLASARRFA LIYADLDNFK SYNDTYGFKN GDRIILLLAR ILAWAIRRHG RKGDLVGHIG GDDFVCITTP ELASRVCKGI TRCFGRLVRH CYSAEDRERG WIMARGRDGV ERNFPLVSVS LAVLDCGMEN NLLEIGERAA HVKHLAKAIA GNAYVLETGN VGGSGDCVCR SGTQSAF
|
| |