Gene Dvul_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1205 
Symbol 
ID4663075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1478220 
End bp1478786 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content59% 
IMG OID639819437 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_966652 
Protein GI120602252 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.262259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.12537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAG GCTTTGGGGA GGCCACCGTT GCCAACACTC ATCGGAACGT TGTCATGAAG 
CTTGCTGCCA AAACTCGCTA CGCGGCGCGT ATTCTTCTTG CTCTCGCCAT GCACGGAGAA
GGCGCACCCA TGACCACCAC ATCCCTGTCC GAACGCACAG GGGTCACTGT TCAGTTCATC
GAACAGATTC TCAAGACCCT GAAGCGTGGG GGGCTCACAC GTAGCACCCG GGGGGCAGCA
GGGGGGCATA CGCTTGCCCG AAAACCGGAC GACATTTCTC TCGGCGACAT CGTACGCCTG
ATGGAAGGGG GCATTCAGCT GACAGTCTGC TGTACCGGTG AGCCCAACGC CTGTTCCCGG
AAATCCGATT GCCTTACCCG TAGTGCGTGG ATCAAGGCCT CTCAGGCTCT GGAAGCCGCT
CTTGATGAAA CGTCGCTCAC TGCCCTGATG TCAGGTGAGG TGACGCATGA CGAGCGCGCG
TGTCGTTCAC TCGCCCGCAC AGGGCTGGCT GATGTGGTCG GACGCAACAC CAAACGGGAA
CGCTCAGACC TTTCCTACGA GATTTGA
 
Protein sequence
MSAGFGEATV ANTHRNVVMK LAAKTRYAAR ILLALAMHGE GAPMTTTSLS ERTGVTVQFI 
EQILKTLKRG GLTRSTRGAA GGHTLARKPD DISLGDIVRL MEGGIQLTVC CTGEPNACSR
KSDCLTRSAW IKASQALEAA LDETSLTALM SGEVTHDERA CRSLARTGLA DVVGRNTKRE
RSDLSYEI