| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1204 |
|---|
| Symbol | |
|---|
| ID | 4664358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1477149 |
|---|
| End bp | 1477670 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639819436 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_966651 |
|---|
| Protein GI | 120602251 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.351528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.116676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATTT CCTCGACAGT CCACTATGCC TCTCGACTTC TCGTCAATCT CGCGCAGCAC
ACGCCTGCCG CGGGCCCCGT GTCTGCCTCC GAGCTTGCAG ACCGCACTGG CATCTCCGTG
AAATTCATCG AAAAGATCAT TCGCCAACTC CGTACGGCGG GGATGGTGCG TAGCGTACGA
GGAGCAACGG GAGGGCATCT GCTTTCCATG CGCCCCGAGG ACGTCACACT TGGAGATGTC
CTGCGTGTGG TCGAAGGCGG TGTCCAGCCT CCCAACTGCT GCGTCGGCGA CGACTGCGAA
GACACCCCCT GCCGCTGCAA GACCGCATGG ATATCCGCTG CCAAGGCTCT TGAAGCCACG
CTCGACCAGT ACACGCTGGC TGACATCATG AGCACCCAGC CCACCGCGAA CGAACGCTCG
ACCAAGCGGC CTGCCGCCCG GATGAGCAAC CCCCAATACG ACAGGACGAC ACCCGGAACA
CCATACGCGC ATGGTCGCTC CTGCGCACAC CAAAGCCAAT AG
|
|---|
| Protein sequence | MRISSTVHYA SRLLVNLAQH TPAAGPVSAS ELADRTGISV KFIEKIIRQL RTAGMVRSVR
GATGGHLLSM RPEDVTLGDV LRVVEGGVQP PNCCVGDDCE DTPCRCKTAW ISAAKALEAT
LDQYTLADIM STQPTANERS TKRPAARMSN PQYDRTTPGT PYAHGRSCAH QSQ
|
|---|
| |