Gene Dvul_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1188 
Symbol 
ID4664790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1457431 
End bp1458057 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content62% 
IMG OID639819420 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_966635 
Protein GI120602235 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000171924 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000921348 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGCCA TTGAAACCCT GCTGCTAACC GGGCTTCTTC TTGCCACCGC CCTGCTGCCG 
CCGGCCCTTG CCCATGCGGC ACAGCCTGCC CCGCCTCCAC CAGCCGGGAT GCAGGTAGCC
GTCTTCGCTG GCGGGTGCTT CTGGTGCATG GAAAAGCCCT TCGATGCGGT GGAGGGGGTG
CTGGAGACGA CCTCTGGCTA TACGGGCGGC ACAGTGGAGT CGCCGACCTA CGAACAGGTC
TCAAACGGCG GGACAGGTCA CGCAGAAGCC TTGCGCGTCG TGTACGACCC CGCCAAAGTG
AGCTATACCG CCCTTCTGGA CACCTTCTGG CACAATGTCG ACCCGTTCGA CGCCGGAGGG
CAGTTTTGCG ACAGGGGCAG CCAATATCGG TCTGCCATCT TCCCGCAGGA CGCATCGCAA
CGCGCCGATG CGGAATCCAG CCTGAAAGCC CTCGAAGAAC GATTCGGACG CCCCGTGGCG
ACCCGCATCG AACCGGCAGG TGCCTTCTGG CCCGCCGAAG AGTACCATCA GGACTATTAC
AAGAAGAATC CGCTACGTTA CAGCTTCTAC CGCTCCAATT GCGGTCGTGA CCGCAAGCTC
AAAGAGGTCT GGGGAAGTCC GAAGTAG
 
Protein sequence
MTAIETLLLT GLLLATALLP PALAHAAQPA PPPPAGMQVA VFAGGCFWCM EKPFDAVEGV 
LETTSGYTGG TVESPTYEQV SNGGTGHAEA LRVVYDPAKV SYTALLDTFW HNVDPFDAGG
QFCDRGSQYR SAIFPQDASQ RADAESSLKA LEERFGRPVA TRIEPAGAFW PAEEYHQDYY
KKNPLRYSFY RSNCGRDRKL KEVWGSPK