| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1180 |
|---|
| Symbol | |
|---|
| ID | 4664285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1445214 |
|---|
| End bp | 1447967 |
|---|
| Gene Length | 2754 bp |
|---|
| Protein Length | 917 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639819411 |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_966627 |
|---|
| Protein GI | 120602227 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.13476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.361728 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCTC TGACAGGAAA GCTCTGGCAC CATCTCAGTG CTGAAAAGGC TACGGAAGCC
CTGCAGACCG ACCCGCAGAA GGGGCTGGAT ACCTTCGAGG TGCAGCGGCG GGCGGTAGAG
TTCGGCCCCA ACGCTCTCAC AGGACGTCGA GGAAAGACGC CCCTGGAGCG GTTCCTGTTG
CAATTCCATC AGCCGCTCAT CTATGTGCTG CTGCTTTCCG GGCTCATCAC GGCTGTGCTG
GGCGAGGTCG TCGACTCTTC CGTCATCATC GGTGTGGTGC TGGTCAACGC CATCGTCGGC
TACATTCAGG AGGCCAAGGC TGCCGGTGCG CTAGAGGCAC TGGCCCGTTC GATGGTGGCA
GAGGCCGAGG TCGTCCGGTC AGGTGGTGTC CGGCGTATCG GCGCCGTGGA CCTCGTGCCC
GGAGACGTGG TGCTGTTGCG CAGCGGCGAT AAAGTTCCCG CTGACTTGCG TCTCGTCACT
GTCAAAGACC TGCGGGTCGA CGAATCGGCC CTTACGGGAG AATCCGTACC TGTCTCCAAG
GCGGTGGGCA CTCTGCCACG GGAGACCGTT CTCGCAGACC GCACCAACAT GGCCTACGCT
TCGGCGCTGG TCACCTACGG CACGGCCACG GGGGTGGTGG TCGCCACGGG CGACCATACC
GAAATCGGGC GTATCTCGAC CATGGTGCAT GAGGCCGACA CACTGGCAAC ACCCCTCACC
CGCCGTATCG AGAAGTTCAG TCACCTGTTG TTGTGGGCCA TCATGGCTCT TGCGGTGCTG
ACCTTCGTCG CCGGAGTGGC ACGCGGCGAG AAGGCCGCGG AGATGTTCAT GGCAGCGGTC
GCGCTTGCGG TGGGTGCCAT CCCCGAGGGC CTTCCGGCAG CCGTGACGGT CATTCTGGCC
ATTGGCGTGT CGCGCATGGC GTCGCGCGGG GCCATCATCC GTAACCTTCC GGCCGTTGAG
ACTCTTGGCG GGGCTTCCGT CATCTGTTCC GACAAGACCG GAACGCTCAC CGAGAACAGG
ATGACCGTCA CCGCCCTCTA TGCGGCGGGC AGAAGGTATG CCGTAACCGG GACAGGCTAT
CGGCCCACCG GGGACATCAT GCCCAGTGGC GAGGCATATG CGCCTGCCGG TGATGATGCG
CATCGTGGAC TTGCCATGGC TGAACTTTCG GGCCGGAAGG CCCTGTTCGC CACGTTGTTG
GGCGGTGCGC TTTGCAATGA TACCCGAATC GAAGCAACCC CCGAAGGCGA CAAGGTCGAG
GGCGACCCCA CCGAGGCCGC ATTGCTGGTT GTGGCTGCGA AGGCGGGCAT TCATGTCGCC
GACGCGTTGA GGACTGCGCC CCGCGCGGAT GCCTTGCCGT TCGAGTCCGA GCATCAGTAC
ATGGCGACGC TGCATCATGG CGAGGCTGGC CCGGTGGTCT ACGTGAAGGG TTCGGTCGAG
GCCGTCCTGT CACGCGCAGA CCGGATGCTG CTGGACGATG GCACGCTCGT TCCGCTTGAT
GTCGCGGCAT TTCGCGAAGA GGTCGAACGC ATGGCGGTGC AGGGATTGCG TGTGCTTGCG
TTGGCCCAGC GCGTGGACGG TGTGGGCGTG GCGCATCTGA CACATGATGA TGTCGCGTCC
GGGCTTGTCG TGGTCGGGTT GCAGGGCATG ATCGACCCGC CCAGGGCCGA GGCGGTGGCG
GCTGTCGCCG CATTCCATGG TGCGGGCGTG AAGGTCAAGA TGATAACAGG CGACCATGCC
GTGACAGCCG CCGCCATCGG CAAGCAGATC GGCCTTGGCG ATGCCGGATG CCCCGGCGAC
CCCGCCTGCA AGGTGCTCAC GGGTGCGCAA CTTGCGGGAC TGACCGACGA TGAACTGGTG
CGTCATGCCG CTGAGACATC CATCTTCGCG CGTGTCGCGC CGGAACAGAA GTTGCGACTG
GTCATGGCGT TGCAGAGCAG GGGCGAGGTC GTCGCCATGA CGGGGGACGG CGTCAACGAC
GCCCCCGCAC TCAAGCAGGC GGACATCGGC GTTGCCATGG GGCACGGAGG GACAGAGGCC
GCCAAGGAAG CTTCGGACAT GGTGCTCACC GACGACAATT TCGCGACCAT CAAGGCTGCC
GTCGAAGAGG GGCGCGGCGT GTACGACAAC CTGCTCAAGT TCATCGTGTG GACGTTGCCG
ACCAACCTTG GCGAAGGGCT GGTCATTCTG GTGGCGGTGC TGCTTGGCAT GGCACTGCCC
ATCCTTCCCG TGCAGATATT GTGGATCAAT ATGACAACCG CCAGCATCCT GGGCATCATG
CTGGCCTTTG AGCCCATGGA ACCGGGCCTC ATGCAGCGCA AGCCGCGCGA CCCGGCGCAC
CCCATTCTCG ACCGTGAGCT CTTCCGGCGC ATCGTTCTTG TGGGCTCGCT GCTTCTGGTG
TCTGCCTTCG GACTCTACAA GTTCGAACTG GCGCAGGGGC ACACGCAGGA GGCGGCACGT
ACCGTTGCCG TGAACGTGTT CGTTCTGGTG CAGACCTTCT ATCTGTTCAA TAGCCGGTCT
TTCACCCGGT CTCCCTTCGA GCTTGGTATC ATGAGCAACC CGTGGACGTT GCTCGGGGCG
GCGTGCATGA TCGTCTTGCA GGTGGCCTTC ACCTATGTGC CTGTCATGAA CGGGCTGTTC
GGTAGCGCCC CCATAGGACT GGGGGCATGG TTGCGTATCC TTGGTGTCTC GGTCCTCGCC
TATGGCGTTG TCGAGGCGGA CAAGAAGCTT CGGGCCAGGG GTGCATTGAA GTAA
|
|---|
| Protein sequence | MDSLTGKLWH HLSAEKATEA LQTDPQKGLD TFEVQRRAVE FGPNALTGRR GKTPLERFLL
QFHQPLIYVL LLSGLITAVL GEVVDSSVII GVVLVNAIVG YIQEAKAAGA LEALARSMVA
EAEVVRSGGV RRIGAVDLVP GDVVLLRSGD KVPADLRLVT VKDLRVDESA LTGESVPVSK
AVGTLPRETV LADRTNMAYA SALVTYGTAT GVVVATGDHT EIGRISTMVH EADTLATPLT
RRIEKFSHLL LWAIMALAVL TFVAGVARGE KAAEMFMAAV ALAVGAIPEG LPAAVTVILA
IGVSRMASRG AIIRNLPAVE TLGGASVICS DKTGTLTENR MTVTALYAAG RRYAVTGTGY
RPTGDIMPSG EAYAPAGDDA HRGLAMAELS GRKALFATLL GGALCNDTRI EATPEGDKVE
GDPTEAALLV VAAKAGIHVA DALRTAPRAD ALPFESEHQY MATLHHGEAG PVVYVKGSVE
AVLSRADRML LDDGTLVPLD VAAFREEVER MAVQGLRVLA LAQRVDGVGV AHLTHDDVAS
GLVVVGLQGM IDPPRAEAVA AVAAFHGAGV KVKMITGDHA VTAAAIGKQI GLGDAGCPGD
PACKVLTGAQ LAGLTDDELV RHAAETSIFA RVAPEQKLRL VMALQSRGEV VAMTGDGVND
APALKQADIG VAMGHGGTEA AKEASDMVLT DDNFATIKAA VEEGRGVYDN LLKFIVWTLP
TNLGEGLVIL VAVLLGMALP ILPVQILWIN MTTASILGIM LAFEPMEPGL MQRKPRDPAH
PILDRELFRR IVLVGSLLLV SAFGLYKFEL AQGHTQEAAR TVAVNVFVLV QTFYLFNSRS
FTRSPFELGI MSNPWTLLGA ACMIVLQVAF TYVPVMNGLF GSAPIGLGAW LRILGVSVLA
YGVVEADKKL RARGALK
|
|---|
| |