| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1176 |
|---|
| Symbol | |
|---|
| ID | 4664132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1441088 |
|---|
| End bp | 1442659 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639819407 |
|---|
| Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
|---|
| Protein accession | YP_966623 |
|---|
| Protein GI | 120602223 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0131066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.294907 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGATCGC TTTGCGCGAT ATGGTATGTG TTGCAGGGTC GGTCCGACAC CGCCGAGTCG
CAGTCAGAAA TACCTGAATA TCAACTATGG AATAGTAGGG TGGCGTTGAT GAAGAGCAAG
AAAATATTCG GGATGCAGAT CCCTGAGAAT GTAGAGAATA TATCAGTCGT TTGCAGCGCA
GCGCGTGAAT GCGCGAGGGC AAGAGGCTTT TCACAGGAAG ATGTGCAGAC GTTTTGCCTT
GTTGTGGAAG AGGCCCTGAC CAACTCGATC GAGATGGGTT TTGGGGATAC AGAGAATGAG
GTCGATATCA CAATCTATAA CATAACGTCA GGGCTTGGGG TCAAAATTGA CAGCGTATGT
TTGCCTTTGG AGCCTGAAAA ACTTCCGCAG TATAGTTTTC AAAGAGTCTC ACAATACAAT
GACACGACTG GCTTGAGTTA TCATCTTATG AAAAACATGT CAGATAGTTT TCGTGTTTCT
ATTAGTGAAG ATGGGGCGAG AGAGCTGTAT TTTGAAAAAT ACATTCCTGA ACAGAAAGTT
AAAGATGCGG TCCAGCGCAA AAAAACACTT CGAGTTACAA CAGAGCATAC CAAGCGATTT
GCAGTGCCTG AAGACGCAGA GAAGATTTCT CGTCTTGTCT TGCGGTCGCA TGATGCAGTT
TTGTTCGGTG AGAGTATATA TTATCCTGAT ATGGTTAAAG AGATGCTTGC GGAAAAGAGG
ATGGTTTCAG TCGTTGCAGA GGCTGAATGC GGAGAGTTGA TAGCCCACTT CGCTCTTTTG
AAGGACATCT CTGGAGACCG GGTGGAGGAG TTGACCTATG TGGTAAGTGA TAAGAATTTC
AAAAGTCGTG ACACTACGAA GTTGCCTGCA ATACTGATTG AAGATGCCAA GCGACGAGGT
GTGTACGCAA TTCAATCTTA TGTCGTGACC AATCATATAT ACGCGCAAAA AGGATGCCTG
GCTGATGGTT TTTCTGAAAA CGCCCTGTAT CTTGCGCTGA ATACAGCCTC CCGCCATAAG
CAGAATGAAG AGTCTTCATT GCATAGGATA GGCACCCTAG GGCTTGTAAG ATATCTTGGT
GCGAGAGAAT CTGCCCCCTT GTTTCTTCCG CCTCGCCACA GGGAGATGAT TTTGGATATA
TACGCACACA TGGGGGTTGA ACCGGTCGTT GCTGAAAAGA CTGCTGAAAG CGATTCAATG
CGTGGGTGTT CGCAAATCGT GACGGATGTA GAGTTCAAGG AAGGCTGGAT GCTGATTGTG
GTAAAGGAAT ACGGCCCTGA TACGTTCTCC CATCTGAAAA GTGAGTTCTA CAAGGCTGTC
GTTCAAGGGA TTCCATCTAT CCAGCTCGGG CTTCCTCTCG CAAATGCAAT GACTTTGGAA
ATGTGCAGTG AGTTTGAGTC GATGGGGTTC TTCTTTGCCG GAGTGTCATC TGGTTACAAC
AGCAGCGAGA ACTTGATGCT GCAGTATTTG AACGGTGTTG AACCAGGATT TGAATCGATA
CATACATTCT CTGATTTTGC GAAAAAACTG AAAGCTTATG TTCATCAGTG CTGGGAGGAA
AGGGCCGTTT AG
|
|---|
| Protein sequence | MGSLCAIWYV LQGRSDTAES QSEIPEYQLW NSRVALMKSK KIFGMQIPEN VENISVVCSA
ARECARARGF SQEDVQTFCL VVEEALTNSI EMGFGDTENE VDITIYNITS GLGVKIDSVC
LPLEPEKLPQ YSFQRVSQYN DTTGLSYHLM KNMSDSFRVS ISEDGARELY FEKYIPEQKV
KDAVQRKKTL RVTTEHTKRF AVPEDAEKIS RLVLRSHDAV LFGESIYYPD MVKEMLAEKR
MVSVVAEAEC GELIAHFALL KDISGDRVEE LTYVVSDKNF KSRDTTKLPA ILIEDAKRRG
VYAIQSYVVT NHIYAQKGCL ADGFSENALY LALNTASRHK QNEESSLHRI GTLGLVRYLG
ARESAPLFLP PRHREMILDI YAHMGVEPVV AEKTAESDSM RGCSQIVTDV EFKEGWMLIV
VKEYGPDTFS HLKSEFYKAV VQGIPSIQLG LPLANAMTLE MCSEFESMGF FFAGVSSGYN
SSENLMLQYL NGVEPGFESI HTFSDFAKKL KAYVHQCWEE RAV
|
|---|
| |