Gene Dvul_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1171 
Symbol 
ID4663768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1433596 
End bp1435587 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content61% 
IMG OID639819401 
Productmethionyl-tRNA synthetase 
Protein accessionYP_966618 
Protein GI120602218 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0932376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.309916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGCT TTTATGTGAC GACACCCATC TACTATGTGA ACGCCAAGCC CCACCTCGGG 
CATGCCTATA CGACCATCGT CGCCGACAGT ATGCGCCGGT TCCAGCGCCT TCTCGGCAAG
GACACCTATT TCCTCACCGG GACGGACGAA CACGGCGACA AGATAGTGCA GGCAGCCGAA
AAGGCCGGAG TTTCACCCAA GGATTTCGTC GACGGCGTGA GCGGGCAGTT TCGTGACCTG
TGGCCGCATC TTGGTGTCGA ATATGACCAG TTCATCCGCA CCACCGACCC GGAACACAAG
AAGGTGGTGC AGGCGTTCCT GCAGCGGGTC TATGACAATG GCGACATCTA TTTCGGCGAG
TACGGCGGGC ACTACTGCTA CGGCTGCGAA CGCTTCTACA CCGAAAAGGA GCTCGAGAAC
GGCCTGTGCC CGCAGCATCA GGTGAAGCCG GAGTACATCG CCGAGAAGAA CTACTTCTTC
CGCATGTCCA AGTATCAGGG GTGGCTGAAG CAGCACATCC TGGACAACCC CGATTTCATC
CGGCCCGAAC GTTATCGCAA CGAAGTGCTC TCCATGCTGG ACAGCGGGGC GCTCGAGGAC
CTCTGCATAT CACGCCCCAA GTCGCGCCTC ACATGGGGCA TCGAACTTCC GTTCGACACC
GATTATGTGT GCTACGTGTG GTTCGACGCG CTTCTCAACT ACGTGTCGGC ACTGGGGTGG
CCCGACGGTG ACCGTTTCGC CAACTACTGG CCCGGAGTGC AGCATCTCGT GGCCAAGGAC
ATCCTCAAGC CGCACGCCGT GTTCTGGCCT ACGATGCTGA AGGCGGCGGG GCTTGAACCG
TACAACAATC TCAATGTCCA CGGTTACTGG CTGGTGCGCG ACACCAAGAT GTCCAAGTCG
CTTGGCAACG TCGTAAGTCC GCTGGAGATG ATCGACCGTT ACGGCCTCAA CGCCTTCAGG
TATTTTCTCC TGCGCGAGAT GCACTTCGGC AGCGACGCGA GTTTCTCCGA GGAGGCACTC
GTGGGACGCC TCAACGCCGA CCTCGCCAAC GACCTTGGCA ATCTCTACAG CCGGGTGTTG
TCCATGACGG CGAAGTACTT CGGCGGGGTC GTACCCGCAC CCGGCGCCTA TACCGAAGAG
GACGAGACCC TGCGGGCACT CGCTGTCGAG GCCCAGCGTA ATTTCTGCAA CCTCTTCGGT
CGTGTGCGCT TCTCCAATGC CCTTGAATCG CTGTGGGAAC TCGTGCGTGC CCTCAACAAG
TACGTAGACA GCGCCGCACC CTGGACGCTC TTCAAGCAGG GCGACACCAA GCGACTTGGC
ACGGTCATGT ACACCTTGCT CGAATCCATG CGCAAGGTGG CGGTGCACCT GCTTCCCGTC
ATGCCCGAGG CTGCGACGTC GATGCTGGCG CAGCTTGGTC TCGAGGTGAA CGTCGACGCA
GTCGACCTTG GCAACGAGGC CGAAACATGG GGCGGCTTGC AGCCCGGCAC CACGGTCGCC
GGGGCATCGA ACCTGTTCCC GAGGGTTGAA CTCGTGCGGG AGAAGGATGA GCCTGCCGAG
GTGGCTTCCG CGAAAGGGAA GCCCGCTGAC GGTGCCGGCA CGGCGAAGAA CGCCAAGCCT
GCCGCTGTTG CACCCGCGCC TGCTGCTTCT CCCGCGGCGG ATGCCGGAGT GATCGACTTC
GAAGACTTCC AGAAGGTCGA CATCCGCATG GGAACCGTTG TGGCAGTCGA GCGTCATCCC
AACGCCGACA AGTTGCTGCG AGTCGAAGTC GACCTCGGCG AGGAGAAGCC ACGGCAGATT
GTGGCGGGGC TTGCCGCCTA CTTCTCTCCT GAACAGTTGC AGGGGCGTCA GGTCGCTGTG
GTTGCCAACC TCGCTCCGCG CAAGCTGCGC GGGCTGGAAT CGCAGGGGAT GATCCTTGCC
GTCCGTCAGG GTGAGGGGAT GGAACTCGTG TCTGTTTCCG GCCCGGTCTC CCCCGGCAGC
AAAGTGTCGT AG
 
Protein sequence
MDRFYVTTPI YYVNAKPHLG HAYTTIVADS MRRFQRLLGK DTYFLTGTDE HGDKIVQAAE 
KAGVSPKDFV DGVSGQFRDL WPHLGVEYDQ FIRTTDPEHK KVVQAFLQRV YDNGDIYFGE
YGGHYCYGCE RFYTEKELEN GLCPQHQVKP EYIAEKNYFF RMSKYQGWLK QHILDNPDFI
RPERYRNEVL SMLDSGALED LCISRPKSRL TWGIELPFDT DYVCYVWFDA LLNYVSALGW
PDGDRFANYW PGVQHLVAKD ILKPHAVFWP TMLKAAGLEP YNNLNVHGYW LVRDTKMSKS
LGNVVSPLEM IDRYGLNAFR YFLLREMHFG SDASFSEEAL VGRLNADLAN DLGNLYSRVL
SMTAKYFGGV VPAPGAYTEE DETLRALAVE AQRNFCNLFG RVRFSNALES LWELVRALNK
YVDSAAPWTL FKQGDTKRLG TVMYTLLESM RKVAVHLLPV MPEAATSMLA QLGLEVNVDA
VDLGNEAETW GGLQPGTTVA GASNLFPRVE LVREKDEPAE VASAKGKPAD GAGTAKNAKP
AAVAPAPAAS PAADAGVIDF EDFQKVDIRM GTVVAVERHP NADKLLRVEV DLGEEKPRQI
VAGLAAYFSP EQLQGRQVAV VANLAPRKLR GLESQGMILA VRQGEGMELV SVSGPVSPGS
KVS