Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1171 |
Symbol | |
ID | 4663768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1433596 |
End bp | 1435587 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639819401 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_966618 |
Protein GI | 120602218 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0932376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.309916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCGCT TTTATGTGAC GACACCCATC TACTATGTGA ACGCCAAGCC CCACCTCGGG CATGCCTATA CGACCATCGT CGCCGACAGT ATGCGCCGGT TCCAGCGCCT TCTCGGCAAG GACACCTATT TCCTCACCGG GACGGACGAA CACGGCGACA AGATAGTGCA GGCAGCCGAA AAGGCCGGAG TTTCACCCAA GGATTTCGTC GACGGCGTGA GCGGGCAGTT TCGTGACCTG TGGCCGCATC TTGGTGTCGA ATATGACCAG TTCATCCGCA CCACCGACCC GGAACACAAG AAGGTGGTGC AGGCGTTCCT GCAGCGGGTC TATGACAATG GCGACATCTA TTTCGGCGAG TACGGCGGGC ACTACTGCTA CGGCTGCGAA CGCTTCTACA CCGAAAAGGA GCTCGAGAAC GGCCTGTGCC CGCAGCATCA GGTGAAGCCG GAGTACATCG CCGAGAAGAA CTACTTCTTC CGCATGTCCA AGTATCAGGG GTGGCTGAAG CAGCACATCC TGGACAACCC CGATTTCATC CGGCCCGAAC GTTATCGCAA CGAAGTGCTC TCCATGCTGG ACAGCGGGGC GCTCGAGGAC CTCTGCATAT CACGCCCCAA GTCGCGCCTC ACATGGGGCA TCGAACTTCC GTTCGACACC GATTATGTGT GCTACGTGTG GTTCGACGCG CTTCTCAACT ACGTGTCGGC ACTGGGGTGG CCCGACGGTG ACCGTTTCGC CAACTACTGG CCCGGAGTGC AGCATCTCGT GGCCAAGGAC ATCCTCAAGC CGCACGCCGT GTTCTGGCCT ACGATGCTGA AGGCGGCGGG GCTTGAACCG TACAACAATC TCAATGTCCA CGGTTACTGG CTGGTGCGCG ACACCAAGAT GTCCAAGTCG CTTGGCAACG TCGTAAGTCC GCTGGAGATG ATCGACCGTT ACGGCCTCAA CGCCTTCAGG TATTTTCTCC TGCGCGAGAT GCACTTCGGC AGCGACGCGA GTTTCTCCGA GGAGGCACTC GTGGGACGCC TCAACGCCGA CCTCGCCAAC GACCTTGGCA ATCTCTACAG CCGGGTGTTG TCCATGACGG CGAAGTACTT CGGCGGGGTC GTACCCGCAC CCGGCGCCTA TACCGAAGAG GACGAGACCC TGCGGGCACT CGCTGTCGAG GCCCAGCGTA ATTTCTGCAA CCTCTTCGGT CGTGTGCGCT TCTCCAATGC CCTTGAATCG CTGTGGGAAC TCGTGCGTGC CCTCAACAAG TACGTAGACA GCGCCGCACC CTGGACGCTC TTCAAGCAGG GCGACACCAA GCGACTTGGC ACGGTCATGT ACACCTTGCT CGAATCCATG CGCAAGGTGG CGGTGCACCT GCTTCCCGTC ATGCCCGAGG CTGCGACGTC GATGCTGGCG CAGCTTGGTC TCGAGGTGAA CGTCGACGCA GTCGACCTTG GCAACGAGGC CGAAACATGG GGCGGCTTGC AGCCCGGCAC CACGGTCGCC GGGGCATCGA ACCTGTTCCC GAGGGTTGAA CTCGTGCGGG AGAAGGATGA GCCTGCCGAG GTGGCTTCCG CGAAAGGGAA GCCCGCTGAC GGTGCCGGCA CGGCGAAGAA CGCCAAGCCT GCCGCTGTTG CACCCGCGCC TGCTGCTTCT CCCGCGGCGG ATGCCGGAGT GATCGACTTC GAAGACTTCC AGAAGGTCGA CATCCGCATG GGAACCGTTG TGGCAGTCGA GCGTCATCCC AACGCCGACA AGTTGCTGCG AGTCGAAGTC GACCTCGGCG AGGAGAAGCC ACGGCAGATT GTGGCGGGGC TTGCCGCCTA CTTCTCTCCT GAACAGTTGC AGGGGCGTCA GGTCGCTGTG GTTGCCAACC TCGCTCCGCG CAAGCTGCGC GGGCTGGAAT CGCAGGGGAT GATCCTTGCC GTCCGTCAGG GTGAGGGGAT GGAACTCGTG TCTGTTTCCG GCCCGGTCTC CCCCGGCAGC AAAGTGTCGT AG
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Protein sequence | MDRFYVTTPI YYVNAKPHLG HAYTTIVADS MRRFQRLLGK DTYFLTGTDE HGDKIVQAAE KAGVSPKDFV DGVSGQFRDL WPHLGVEYDQ FIRTTDPEHK KVVQAFLQRV YDNGDIYFGE YGGHYCYGCE RFYTEKELEN GLCPQHQVKP EYIAEKNYFF RMSKYQGWLK QHILDNPDFI RPERYRNEVL SMLDSGALED LCISRPKSRL TWGIELPFDT DYVCYVWFDA LLNYVSALGW PDGDRFANYW PGVQHLVAKD ILKPHAVFWP TMLKAAGLEP YNNLNVHGYW LVRDTKMSKS LGNVVSPLEM IDRYGLNAFR YFLLREMHFG SDASFSEEAL VGRLNADLAN DLGNLYSRVL SMTAKYFGGV VPAPGAYTEE DETLRALAVE AQRNFCNLFG RVRFSNALES LWELVRALNK YVDSAAPWTL FKQGDTKRLG TVMYTLLESM RKVAVHLLPV MPEAATSMLA QLGLEVNVDA VDLGNEAETW GGLQPGTTVA GASNLFPRVE LVREKDEPAE VASAKGKPAD GAGTAKNAKP AAVAPAPAAS PAADAGVIDF EDFQKVDIRM GTVVAVERHP NADKLLRVEV DLGEEKPRQI VAGLAAYFSP EQLQGRQVAV VANLAPRKLR GLESQGMILA VRQGEGMELV SVSGPVSPGS KVS
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