| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1165 |
|---|
| Symbol | |
|---|
| ID | 4663827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1422087 |
|---|
| End bp | 1425041 |
|---|
| Gene Length | 2955 bp |
|---|
| Protein Length | 984 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639819395 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_966612 |
|---|
| Protein GI | 120602212 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3893] Inactivated superfamily I helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.5757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAG CAAAGAACAG AGGGCATTCC GCCCGGCAGC CCTTCCATAT CGTCCCGTGG
GACAGCGACT TTCTCGAGGC GGTACTGCAG CTTGCCCTTC GCCTCACTCG CAACCGCCCC
GGCGACGCGG TGCTCGTCTT CCCGCACGGA CGCCCCCGCC GCCACCTCAT CGACAGACTC
CGCAACGCCC CCGGCGTTCC CAAGCCCTGC CTGCTGCCGC AGATGTACAC GGTGCAGGAG
TTGTTCACCC GCATCCGGGC CGAACGCGAA CAGCGCCCGC CCCAGACCGT GGGGCTGCTG
GACAGGGTGG GGCTGCTGCT CGAATGCGTG ACCGACCTCG CCTCTCCGGG CACACCGCTG
TGCGAGGCCC TCACAGCGGG CGGGCAACGC CACTTCTTTC CGTGGGGGGC ACGCCTCTCG
GCCCTTCTCG AAGACTGCTT CTCTCAGGGG CTGCGCCCCG ACGACCTCAC GCACATGGAA
GGGCAGGTCG CCCCCTTCGC GGCATCATTG CTCGAGAACC TCGGGCGCAT CCACGAACGC
TACACCCTCG CCCTCATGGA ACGGGGCTGG AGCACACCGG GCTTCGATGC CTTCCGTGCC
GTGGACGGGC TCGAAGGAAC CCCGTCATGT CTCGAAGGAC GTACCGTCAT CATCGCCGGA
TTCGCCGCGC TCAACGGTAC CGAGGAACGA CTGTTCGAGC ATCTGTGGCG TCACTGCGGC
GCCGACATAT GCCTGCACAC CGACGCAGCC GTGGCACGCA TGGGGCAGGA ACGCGTGCAC
TGGACGTGCG AGGATCATGT AAGGTGGCTC ACCTCATGGC GGGCAGAAGC CGAACTCCTG
CACGCCCCCC GGGCCTTCAA GCCCCGCGTC TCCTTCTGCG AAGGATACGA CCTGCATTCG
CAGCTGCACG AACTCGGAAC GCTGCTCCAG AACACCGAAG ACCTCTCGTC CACGGCGGTG
GTGTTGCCCG ATACCGGGCT GCTCATGCCC GTACTGCACC ACCTGCCCAC CAAGGCCGTC
AATATCTCCA TGGGCTACCC GCTGGTACGC TCCACCCTGT TCCGGCTTCT CGAAACGCTG
ATGCGCCTGC AGGAGACCCG CGGGTCCAAC GGGCAGTACC ACTGGCGCGA GTGCATCGAC
CTCATCCGGC ACCCGTACCT CAAGATGCTC GAAGTCGAAG GCACCCGCCC GCTGCCGGAG
GTCTTCCACG TGGTGGAGGA CAGGCTGAGG GGCGGCACAC GCTTCGCCGA CCTCGCAACC
GTGATGGAAG AGGCGCTTGC CGAGACGGAC GTGGCCCCCG GAACCCAGGA CCTGTGCCGC
ACACTTCTCG ACCTCTGCCT CTCCCGATGG GAGAGGGCCT CAACCCCCGC TGCCCTCGCC
GACGCGGTGG GCTTTCTGTG CGCCGTGCTG CTGGAACGGG GCGGCGACCT GTGGGAACGC
TTTCCCATCG ATGCCGAATG CCTGTTCCGG CTCATGCAGC GCGTCATTCC CGCCCTGCGC
GAAAGCGAAC TTGCCGCGAC GGCGTTCCCG CAGGACGTGC TCTTCACCAT CCTGCGCGAG
ACGGTACGCG CCGAAAGAGT GCCCTTCGAG GCCGACCCCA TCGGTGGCCT TCAGGTACTG
GGCATGCTCG AATCACGCCT GCTCACCTTC CGTCGTGTCA TCGTGCTGGA CGCCACCGAC
GACAGGCTGC CCGGTGCCCC CCCCAACGAC CCGTTGCTCC CTGACAGCCT CCGGCCGCAG
GTGGGGTTGC CCGATGCCCG CAGGCGCGAA CGCATCACGG CGCACAACTT CCACCGGCTT
CTGGCAGGGG CCGAAGAGGT GAACCTGCTG TGGCAGGCGG GTGTTGAACG CTCCGGCCTG
CTGGACGACA AGAAGGCCCG CAGCCGCTTC GTGGAGGAGA TGCTCTGGCA CGAGGAACGT
GCGGCAGGCA GGCTGTTCCG CCCCGGAGAG GGGCCCCTCG GCACAGTCAC CTGCACCGTC
CGGCCCTTCG AGAGCACACC ACGGCATATC CTGAAGACCG ACGCGGTGCG CGACGCCCTT
GCACGGTTCT TCGAGCGTCC GGTCTCGCCT TCGCGCCTCG ACGCCTATCT CACCTGTCCG
TTCCGCTTCT ACCATGAGCA CCTGTGCCGC CTTGCGCCGC CCGACGAGGT CATCGAGGGA
GAAGACCCCG CCGCCGTCGG CACTCTGCTG CACGAAGCCC TCAACCGTTT CTATGCCCCG
TGGCGTGGCA TAGAGGTCAC GCGAGACAGA CTCGACCCCG AGATGCTCGA ACGCCACTTC
CGACAAAGCC TGCATGAAAG CGGCCTTGCC GACAGGTTCC CGGCAGACGC CCTCGCCATG
CTCGAAACGG CAGGGCCGGA ACGGTTGCGC CGCTTTCTCG CCCGTCAACC CGACCGTACC
GTGGTGCTGC ACCTCGAAGA GGCGTTCACC GCCGACGTGG AGGTCGACGG CCGCACACGC
CGCCTCGGGG GACGGCTGGA CAGGGTGGAC AGACGCGGCG AAGGGGCCGT GGTACTCGAC
TACAAGACCG GCAGCCTGCG CACCGTCCGC CCTGACGTGT GGGAAGACCA CGGCCTATGG
GAACGTGTGC GGACATGGGA ACCCGCCGCC GACAGGCCCC TGACCGGCCA AGATGAAGGG
TCCCGCGAAG ACCTGCTTGA TGAACTGGCC CGCCGTATGC CCAGCGTACA GCTACCCTGC
TACATCCACC TCTACGGACA GGCCACGGGT GAGGATGTGC ACGACGCCGC ATGGGTGGAA
TTGCGGGACA GCGGCGACGA ACGTCCGCTC TTCGGCGACA GGTGCGACGA TGCTGTCCGG
GACGAGGCCA TCAGCCGTCA CATCCCCGAC CTGATGCGCT TCCTGCTGCG GCATATGGAG
TTGGCACCCG CCTTCATGCC CCGCCACGGC AGACATTGCG ACTGGTGCTC CTGTCGAAAA
CTGTGTAGGG TCTGA
|
|---|
| Protein sequence | MTRAKNRGHS ARQPFHIVPW DSDFLEAVLQ LALRLTRNRP GDAVLVFPHG RPRRHLIDRL
RNAPGVPKPC LLPQMYTVQE LFTRIRAERE QRPPQTVGLL DRVGLLLECV TDLASPGTPL
CEALTAGGQR HFFPWGARLS ALLEDCFSQG LRPDDLTHME GQVAPFAASL LENLGRIHER
YTLALMERGW STPGFDAFRA VDGLEGTPSC LEGRTVIIAG FAALNGTEER LFEHLWRHCG
ADICLHTDAA VARMGQERVH WTCEDHVRWL TSWRAEAELL HAPRAFKPRV SFCEGYDLHS
QLHELGTLLQ NTEDLSSTAV VLPDTGLLMP VLHHLPTKAV NISMGYPLVR STLFRLLETL
MRLQETRGSN GQYHWRECID LIRHPYLKML EVEGTRPLPE VFHVVEDRLR GGTRFADLAT
VMEEALAETD VAPGTQDLCR TLLDLCLSRW ERASTPAALA DAVGFLCAVL LERGGDLWER
FPIDAECLFR LMQRVIPALR ESELAATAFP QDVLFTILRE TVRAERVPFE ADPIGGLQVL
GMLESRLLTF RRVIVLDATD DRLPGAPPND PLLPDSLRPQ VGLPDARRRE RITAHNFHRL
LAGAEEVNLL WQAGVERSGL LDDKKARSRF VEEMLWHEER AAGRLFRPGE GPLGTVTCTV
RPFESTPRHI LKTDAVRDAL ARFFERPVSP SRLDAYLTCP FRFYHEHLCR LAPPDEVIEG
EDPAAVGTLL HEALNRFYAP WRGIEVTRDR LDPEMLERHF RQSLHESGLA DRFPADALAM
LETAGPERLR RFLARQPDRT VVLHLEEAFT ADVEVDGRTR RLGGRLDRVD RRGEGAVVLD
YKTGSLRTVR PDVWEDHGLW ERVRTWEPAA DRPLTGQDEG SREDLLDELA RRMPSVQLPC
YIHLYGQATG EDVHDAAWVE LRDSGDERPL FGDRCDDAVR DEAISRHIPD LMRFLLRHME
LAPAFMPRHG RHCDWCSCRK LCRV
|
|---|
| |