Gene Dvul_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1159 
Symbol 
ID4663185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1414763 
End bp1416769 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content67% 
IMG OID639819389 
ProductDNA protecting protein DprA 
Protein accessionYP_966606 
Protein GI120602206 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.20942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAG GTGCCGACCC CGGTTGTGCC GACCCGGTAG CTGACGGCAG ATGTCAGAAG 
CGTCCCACCC GTTTCGATGA ACTCGACGAG GCCGCAAGAG CAGAATTGTG GGCCGTTCTC
GCATTGCGGC ACACTGAAGG TCTAGGTGCG CGTTCACACA TCCGGCTCAT CCGGCATTTC
GGGTCGGCAT ACGCGGCCGT GCAGCGTGCC CCGCATCTTG CCGGTAGCGG CGTGCGGCAG
CAGGCTGCAC AGGCCCTCGC CTCCGGGCGC TGGCGGGCGA CTGCCAAGGC CGAGTGGGAC
GCATTGCGCG CCTGCGACTG TGGCATCCTG CTATGGAACG ACCCACGTTA TCCCGAGAGG
TTGCGCTCTC TCCCCGATGC TCCCGCATTG CTCTACTGCA AGGGGGATGT GGCATTGCTG
GACAATCCGG CGCTGGGGGT GGTCGGGTCG CGGTTGTGTT CCCGGCAGGG GATGCGCATG
GCGGCGCAAC TCGCCCGCGA CCTTGCCTGT GCAGGTGTGA CCATCGTCTC CGGCATGGCG
CGCGGTATCG ACCGTGAAGC GCATCTTGCC GGGTTGCAGG GCGTCGGCTG TACTGTCGGT
GTGCTCGGTA CGGGGATAGA CATCCGTTAT CCCTATGATA ACGAAGACCT CTTCGAACGC
ATGGCATCTG AAGGGCTGCT CGTGACCGAG TTCGCCCCCG GCGCGCGCCC CGAACCACGC
CACTTCCCCA TCCGCAACCG TGTCATCAGC GGTCTCTCAC TGGGCGTGCT GGTGGTCGAG
GCCGCGACAC GCAGTGGCAG CCTCATCACG GCCCGTCTCG CACTGGAACA GGGCCGTGAG
GTGTACGCCA TGCCCGGCCC CGTTTCGGCC CAGACGTCGC GAGGGTGTCA TGACCTGCTC
GAAGAAGGGG CGCATGCCGT GGGTTCGGCG GAAGACATCC TCGTCGACCT CGCACCACAA
TTGCTTGGAG CACTGCGTGC CCGGGCGGAG GCTGCGGGGG GTGTGCCGCC CGCTGCCCCT
CGGGGCGATG ACAGCATTTC CACGGACGTT CCGTTGTCCG GTGGACGTGT CCCCGTGAGG
GCGAAGGTCG TGCCGTCTGG TGCCGGACAG GAGGGGGGCG CACCGGGGCA CAGGGGTGGG
CCGGGCCCAG ATGCGTCGGG CCCACATGAG TTGGGCCCAG ATGCGTCGGA CTCGCATACT
GTGAGCATAG GAGCGTCGGG CGCAGACATG CCGGATACGG AAGCGCAGGA CGCAGCCATG
TGGGGCGGCC ACACTCTGGA CGGAGATGCC GCAGGAAATG GCGCTGCCGT GCCCGTGGAT
GGGCCGCCCG GTGGCATCGG ACGTGCGAAA CAGGACGCCG GGGTGGGGCG CCTGATGGAC
AGGCTGCGCC AGCACCTCGC CCGTCATGAT GTGCCCGAAG ACGACACGTG GCGCGACGAC
AAGCGCAGAC AAGACACGTA TGCCGAAGAC GAGCGCGCCA AACTCGAGAG TCCCGAAGAG
ACGCATCGAC CGTCCTTGCA CGATAGACGT CACGTACCTC CCGTGCGTGA CGGGCGTGGG
GTGCAGGGAA TACCCCCGGC GTGCATCGCC ACGCAAAGGA ACGGCCCGCC CGTTGCTGAA
GCTGCTTGCG GCGCTCAATC TTGCGCAACG GCAAGCCCGT CGCGATTCCC TTTCGCGCCC
TTGGGGCAGA CCGCACCGCC TGATGCTTGC CCCCCTGTCG CGTCGGCCCC CGTCATATCC
GACGAGGAGG GGGCGACCGC GGTGTCCAGC GCCTCCCTTC GTGCCACTGC GCGCGGAGTG
CACGCCGTAA ACCCTGACAT GCCCAAGGAG CATGGCGACC CGGAAAGTCG TTTGCTTGCG
CTTCTGCGTG ACATGGGCGA GGCCCATGTG GACGACCTGT GCCGCGCTCT TGCCATGGCG
CCGGGCGACG TCAGCGGAAC CCTGCTTCTG CTGGAAGTGC AGGGTGTTGT GCGGCGGTTG
CCGGGGATGC GCTACGCGAG TATGTAG
 
Protein sequence
MTRGADPGCA DPVADGRCQK RPTRFDELDE AARAELWAVL ALRHTEGLGA RSHIRLIRHF 
GSAYAAVQRA PHLAGSGVRQ QAAQALASGR WRATAKAEWD ALRACDCGIL LWNDPRYPER
LRSLPDAPAL LYCKGDVALL DNPALGVVGS RLCSRQGMRM AAQLARDLAC AGVTIVSGMA
RGIDREAHLA GLQGVGCTVG VLGTGIDIRY PYDNEDLFER MASEGLLVTE FAPGARPEPR
HFPIRNRVIS GLSLGVLVVE AATRSGSLIT ARLALEQGRE VYAMPGPVSA QTSRGCHDLL
EEGAHAVGSA EDILVDLAPQ LLGALRARAE AAGGVPPAAP RGDDSISTDV PLSGGRVPVR
AKVVPSGAGQ EGGAPGHRGG PGPDASGPHE LGPDASDSHT VSIGASGADM PDTEAQDAAM
WGGHTLDGDA AGNGAAVPVD GPPGGIGRAK QDAGVGRLMD RLRQHLARHD VPEDDTWRDD
KRRQDTYAED ERAKLESPEE THRPSLHDRR HVPPVRDGRG VQGIPPACIA TQRNGPPVAE
AACGAQSCAT ASPSRFPFAP LGQTAPPDAC PPVASAPVIS DEEGATAVSS ASLRATARGV
HAVNPDMPKE HGDPESRLLA LLRDMGEAHV DDLCRALAMA PGDVSGTLLL LEVQGVVRRL
PGMRYASM