| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1149 |
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| Symbol | |
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| ID | 4662918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 1400581 |
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| End bp | 1403082 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639819378 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_966596 |
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| Protein GI | 120602196 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.355741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.205094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGCA TTATAACGGT TTTGCTTCGA ACTTCATGGT ACATGTCAGG CATGTGGAAG
CCTGTAATGT CATGGTCGGT GTCACCATTC CGGATATCTG TCCTGCGGAG TCTTGTGCTG
GCATGGACCA TCATGCTGTG CTTCGTCGCG GCGGTGGCAC TGGCGCAAGT GCAGGCGCGC
CCCCATGTGC TGCTCCTGAA TTCGTATCAT CAGGGATTCC GCTGGACCGA CGAAGTCGTG
CAGGCCGTGC GCGGTACGCT AGCCTCCGCA TCGCCTGTGG AAATCCATGT GGAATACATG
GACGCCAAGC GTATCGAATC GCCGGACTAC CTTGACCAGT ACGCAGACCT GCTGCGCCGC
AAGTATACAG GATTACGGCT TTCCGTCGTC GCGACATCCG ACGACCCCGC CTTCGATTTC
GTGTTGCGCC ACCGTGGGCT TTTCGGAGAC GCGCCTGTGG TCTTCTGCGG CACCAACGAC
ATCACGCCAG ACCGTCTCAG GGGGGAAAGC GGAGTGGTCG GGGTGACGGA GACGGTGGAC
TACGAAGGGG GACTTGCCCT CGCCTTGCGT CTGCATCCGG GGGTGCGGCA GATTCTTGTG
GTGGTGGACG ACACCTCCAC GGGACGCCTC GTACGGGAAC GCCTTGAAGG CGTGCGTCGT
TCTCTTCCCC CCGGTGTGTC GCTGCATTTC TCGCCGACCT CCTCCCTTGG GGCGGTGCTG
GATGTCGCCC GTACCACGGG GGCGGATACG CTCATCTTTC TCACCATCTT CAACCGTGAT
GACGCAGGGC GATTCTATGA ATACGACGAA GTCCCCCGGC TGCTGTCGGA AGCCAGCCGG
TCACCGGTCT ATGGTGCATG GGACTTCTAT CTGGGCGATG GAATCGTGGG AGGTGTTCTC
ACCAGCGGAG AGGCGCAGGG AAAAACCGCA GCAGAGTTGG TGCTGGAAGT GCTGAAGCGG
GGAGGGACGA CGGGGCTGCC TCTCATAAGC CGAAGCCCCA ACAAGTTCAT GTTCGACTAC
AGGCAGTTGC AGCGTTTCGG TATCCGGCCG GACAGGTTGC CGAAAGACAG CATCGTCGTG
AACCGTCCTG TGGGGTTCTA TGAACAGAAT CGGCCGCTGG TGCATACCGT CGTAGGGGCC
TTTGTCCTGC TTTCGGGCTT CACCGTCTCG CTGCTGGTCA ATGTCGTGGC CCGCAAAAGG
GCAGAAGCCG CCTTGCGTGT GAGCGAGGCG CGGCTTCGCG GCATATTCGA GAACGCAGGA
GAAGGCATCT TCAGGGTGAC ACTTGAAGGC CGAATCCTGA TGGTCAACCC TGCCATGGCA
CGCATCCTCC GTTACGATTC GGTGGAAGAC CTCATTCGCG TCACGGATGC CGGGGCGCAT
GTGTTGTACC GTGATGCTGG TTGGCGTGAG CGTTATGTCG CAAGGCTGAT GCAGTACGGA
GTGGTGCGTG ATTTCGAGGC CCGGATGGCC GCCCGTACCG GGGAGGACGT GTGGGTGAGC
ATCTCGTCCC GGCTTGTGGT CGATGAAGAG GATGGGACGA CGATCATCGA AGGCATCATG
GCCGACACGA CTGCCCGCAA GGAGGCCGAG TTGGCACTGC AGGCCATGAA CGTCAGTCTC
GAAGCCCGGG TGAGCGAACG CACTGCTGAA CTGGCAAGGG CCAACGATGC CTTGCAGAAG
TCCATGGATG ACCTGCGGGC GATGCAGGAC CGGATTGTGG AACAGGAGAA GTTCGCGGCA
CTCGGCGGCC TTGTGGCGGG GGTTGCGCAT GAGATGAACA CCCCGGTGGG GGTTTGCATC
ACCAGCGCAT CGTTCCTCGC CGACAAGGTG CGCGGTCTTC GCAGCGAGGT GGAAGGCGGC
AGCATACGGC GTTCGGAACT TCTCGACTTC ATGTCGCGTG CAGAAGAGGC GTCGCAGACC
CTTGTCGCAA ATCTCGGGCG CACGGCAGAA CTTGTGCGCG CCTTCAAGCA GCTGGCGGTG
GATGAGGCCG GAACCAACGC CCGGACCATT GAATTGTGCC CGTTCATCGA CGACATCCTC
GGCGGGCTGA GGCCTATCTG CGAACAGGCC GGACACAGGC TTGATTATGA ATGCGATGCC
TGCGGGGTGC AGATGCATGT GGCGCCGCCA GCGCTGGCGC AGGTGGTGGG ACACCTCGTG
CGCAACAGCC TTGACCATGC GTTCCCCACC GGGGGGGCAG GGCGGATGCA GCTCAAGGTA
TCCTGTCCGG AAGGGGGCGT GGAATTGACG TTCTCCGATG ACGGAGTGGG CATGGGGACC
GACGTGCTTT CGCACATCTT CGAGCCGTTC TTCACCACCC GGCGGCAGGC GGGGGCCACC
GGTCTGGGCC TGCATCTCGT CTACAACACG GTGACAAGAA CCCTCGGGGG GACCATCGAG
TGCACAAGCG CACCGGGAGA GGGGACGTGC TTCCGCATCC GGCTGCCCTT GTCAGACCCC
TGTCGCGACA CGCCAGCCGA AGTCGGTTGT GAGCCGGTAT GA
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| Protein sequence | MIGIITVLLR TSWYMSGMWK PVMSWSVSPF RISVLRSLVL AWTIMLCFVA AVALAQVQAR
PHVLLLNSYH QGFRWTDEVV QAVRGTLASA SPVEIHVEYM DAKRIESPDY LDQYADLLRR
KYTGLRLSVV ATSDDPAFDF VLRHRGLFGD APVVFCGTND ITPDRLRGES GVVGVTETVD
YEGGLALALR LHPGVRQILV VVDDTSTGRL VRERLEGVRR SLPPGVSLHF SPTSSLGAVL
DVARTTGADT LIFLTIFNRD DAGRFYEYDE VPRLLSEASR SPVYGAWDFY LGDGIVGGVL
TSGEAQGKTA AELVLEVLKR GGTTGLPLIS RSPNKFMFDY RQLQRFGIRP DRLPKDSIVV
NRPVGFYEQN RPLVHTVVGA FVLLSGFTVS LLVNVVARKR AEAALRVSEA RLRGIFENAG
EGIFRVTLEG RILMVNPAMA RILRYDSVED LIRVTDAGAH VLYRDAGWRE RYVARLMQYG
VVRDFEARMA ARTGEDVWVS ISSRLVVDEE DGTTIIEGIM ADTTARKEAE LALQAMNVSL
EARVSERTAE LARANDALQK SMDDLRAMQD RIVEQEKFAA LGGLVAGVAH EMNTPVGVCI
TSASFLADKV RGLRSEVEGG SIRRSELLDF MSRAEEASQT LVANLGRTAE LVRAFKQLAV
DEAGTNARTI ELCPFIDDIL GGLRPICEQA GHRLDYECDA CGVQMHVAPP ALAQVVGHLV
RNSLDHAFPT GGAGRMQLKV SCPEGGVELT FSDDGVGMGT DVLSHIFEPF FTTRRQAGAT
GLGLHLVYNT VTRTLGGTIE CTSAPGEGTC FRIRLPLSDP CRDTPAEVGC EPV
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