Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1138 |
Symbol | |
ID | 4662331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1384617 |
End bp | 1385258 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639819367 |
Product | thiamine biosynthesis protein ThiF |
Protein accession | YP_966585 |
Protein GI | 120602185 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
TIGRFAM ID | [TIGR02354] thiamine biosynthesis protein ThiF, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.119618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGGCC CGATAGTGAG CCTTTTCGAG GACGGGTTGT CCCGCTATCT CGAACCCTCC CTGCGTGACC GGTTGCGTAA GGCCACTGTC GGTATCGCGG GCGCTGGCGG GCTTGGGTCG AACTGCGCCG TGCTGCTTGC CCGCAGCGGC GTGGGGCGGT TCGTGCTGGT CGACCATGAT GTGGTCGAAC CCTCCAATCT GAACCGCCAG CACTACCTCG CCGCCGATGT GGGCAGGCCC AAGGCCGAAG CACTGGCTGA CGTGCTGCGG GCCATCAACC CCGCTGTCGA CCTCGTCGTG CATGTGCAGC AGTTGGAAGA CGGCAATATC ATAGGTATCT TTGGCGTATG CGATGTGGTG GTGGAGGCCG TCGATGACGC CGCCACCAAA CGGATGCTTG CCGAGACGTT GATGGGGGCA GGGCGCCCGG TAGTGTGCGC CTCCGGCATG GGCGGGTGGG GCGGCCCCCC CATGCGGGAA CGGCATCTCG GAGAGAGCAT GGTCGTCGTG GGTGACTTCA CCAACGAGGT CGGGCCGGGC CTCCCGCCGC TCGCCCCCCG TGTCGTCATG GCCGCTGCGA TGCAGGCCGA TGCGGTGCTT GCGCGTCTGC TGGGCCCGTG TCCCGCCATG AACCACCGCT AG
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Protein sequence | MRGPIVSLFE DGLSRYLEPS LRDRLRKATV GIAGAGGLGS NCAVLLARSG VGRFVLVDHD VVEPSNLNRQ HYLAADVGRP KAEALADVLR AINPAVDLVV HVQQLEDGNI IGIFGVCDVV VEAVDDAATK RMLAETLMGA GRPVVCASGM GGWGGPPMRE RHLGESMVVV GDFTNEVGPG LPPLAPRVVM AAAMQADAVL ARLLGPCPAM NHR
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