Gene Dvul_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1138 
Symbol 
ID4662331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1384617 
End bp1385258 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID639819367 
Productthiamine biosynthesis protein ThiF 
Protein accessionYP_966585 
Protein GI120602185 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID[TIGR02354] thiamine biosynthesis protein ThiF, family 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.119618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGCC CGATAGTGAG CCTTTTCGAG GACGGGTTGT CCCGCTATCT CGAACCCTCC 
CTGCGTGACC GGTTGCGTAA GGCCACTGTC GGTATCGCGG GCGCTGGCGG GCTTGGGTCG
AACTGCGCCG TGCTGCTTGC CCGCAGCGGC GTGGGGCGGT TCGTGCTGGT CGACCATGAT
GTGGTCGAAC CCTCCAATCT GAACCGCCAG CACTACCTCG CCGCCGATGT GGGCAGGCCC
AAGGCCGAAG CACTGGCTGA CGTGCTGCGG GCCATCAACC CCGCTGTCGA CCTCGTCGTG
CATGTGCAGC AGTTGGAAGA CGGCAATATC ATAGGTATCT TTGGCGTATG CGATGTGGTG
GTGGAGGCCG TCGATGACGC CGCCACCAAA CGGATGCTTG CCGAGACGTT GATGGGGGCA
GGGCGCCCGG TAGTGTGCGC CTCCGGCATG GGCGGGTGGG GCGGCCCCCC CATGCGGGAA
CGGCATCTCG GAGAGAGCAT GGTCGTCGTG GGTGACTTCA CCAACGAGGT CGGGCCGGGC
CTCCCGCCGC TCGCCCCCCG TGTCGTCATG GCCGCTGCGA TGCAGGCCGA TGCGGTGCTT
GCGCGTCTGC TGGGCCCGTG TCCCGCCATG AACCACCGCT AG
 
Protein sequence
MRGPIVSLFE DGLSRYLEPS LRDRLRKATV GIAGAGGLGS NCAVLLARSG VGRFVLVDHD 
VVEPSNLNRQ HYLAADVGRP KAEALADVLR AINPAVDLVV HVQQLEDGNI IGIFGVCDVV
VEAVDDAATK RMLAETLMGA GRPVVCASGM GGWGGPPMRE RHLGESMVVV GDFTNEVGPG
LPPLAPRVVM AAAMQADAVL ARLLGPCPAM NHR