| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1125 |
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| Symbol | |
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| ID | 4662209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1365043 |
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| End bp | 1366419 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639819354 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_966572 |
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| Protein GI | 120602172 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.134814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGC CCCGAGACAT CCCCTGCGAA ACCATCATGG AGAGTGTCGC CGACGGCGTG
TTCACGGTCG ACCTCGACTG GCGCATCACC TCGTTCAACC GTGCCGCTGC CGCCATCACG
GGAGTCCCCA CCGAAGAGGC ACTGGGCCGA CGCTGCCGAG ACGTGTTCCA CTCCAGCGTG
TGCGACGGCG CATGTGTCCT GCGCGCCTGC ATGGAACAGG ACACCCCCTT CGGCAGCCGC
ACGGTGTTCA TGGTGCGCAC CGACGGGACG CGCGTTCCCG TCAGCATCAG TGCCGCACCG
CTCAAAGACA GGCGCGGCAG ACTCATCGGC GGGGTCGAGA CGTTCCGCGA CCTCACCGCG
CTGCACCTCA TGCGGCGTGA ACTCGAAGGG CAACGCACCG TAGAGGACAT CGTCACCCGC
AGCCACGCGA TGACGCGCCT TCTCGACCTC CTTCCGCAGA TAGCCGCCAG CGACGCACCG
GTGCTCATTC TCGGCGAATC CGGCACGGGC AAGGAACTCT TCGCCCGTGC GCTGCACAAC
CTCAGCCCCC GCGCCGCGAA ACCGTTCGTG GGCGTCAACT GCGGGGCGCT GCCTGAGAAC
CTGCTCGAAT CGGAACTGTT CGGCTACAAG GCCGGGGCAT TCACTGACGC ACGCCGAGAC
AAGCCGGGAC GCTTCCACAC GGCGGGCGAC GGCACCATCT TCCTCGACGA GATTGGCGAC
ATGCCCCTGC CCTTGCAGGT GAAACTGTTG CGGGTACTTC AGGAGAAGTG CTTCGAACCG
CTGGGGGCGG TGAAGGCGGA ACCCGCGCTG GCGCGTGTCA TTGCCGCCAC CAACCGCGAC
CTTGAACGCA TGACGGCCGA AGGCACGTTC CGCACCGACC TCTACTATCG GCTGAATGTG
GTGCTGTTGC GTCTGCCCCC GCTGCGTGAA CGCCCCGAAG ACGTGCCCGC GCTCATCGAC
CACTGCGTAA GACGACGTAA CCTGCTCACC GGCAAGGACA TCGAAGGCGT CTCGGAGGAT
GTGCTGCACC TCATGCTGCG CTACCCATTT CCGGGCAACG TGCGTGAACT CGACAACATC
ATCGAATATG CCTTCATCCT GTGCGGGCAC GGGTTCATCC AGCTGGAACA CCTGCCGGAG
TACCTGCTGC ACGCAGGGGG CATCGCCACC CCCTCCCTCA CGCCTTCACG TCCGCAGCCC
CGCCCAGCCG GGGTGCCCGG AGACGACGGA CAGCCCGCCA CCCTTGAAGC CATCAAGTAC
CGGGCGGTGG TCGACGCCCT TGCCCGCAAC AATGGCAGGC GGATGGCGAC CTGCCGCGAA
CTGGACATCT CCAAGGACAC GCTGCGCCGC ATCCTGCAAC GTGGCGACAC GAAATGA
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| Protein sequence | MALPRDIPCE TIMESVADGV FTVDLDWRIT SFNRAAAAIT GVPTEEALGR RCRDVFHSSV
CDGACVLRAC MEQDTPFGSR TVFMVRTDGT RVPVSISAAP LKDRRGRLIG GVETFRDLTA
LHLMRRELEG QRTVEDIVTR SHAMTRLLDL LPQIAASDAP VLILGESGTG KELFARALHN
LSPRAAKPFV GVNCGALPEN LLESELFGYK AGAFTDARRD KPGRFHTAGD GTIFLDEIGD
MPLPLQVKLL RVLQEKCFEP LGAVKAEPAL ARVIAATNRD LERMTAEGTF RTDLYYRLNV
VLLRLPPLRE RPEDVPALID HCVRRRNLLT GKDIEGVSED VLHLMLRYPF PGNVRELDNI
IEYAFILCGH GFIQLEHLPE YLLHAGGIAT PSLTPSRPQP RPAGVPGDDG QPATLEAIKY
RAVVDALARN NGRRMATCRE LDISKDTLRR ILQRGDTK
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