Gene Dvul_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1116 
Symbol 
ID4662886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1354721 
End bp1354897 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content60% 
IMG OID639819345 
ProductFlp/Fap pilin component 
Protein accessionYP_966563 
Protein GI120602163 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.139391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA TCATGCAAAG ACTGTTCAAG GAAGAGACCG GCGCCACCGC ACTCGAATAC 
GGCCTTATCG CCGCCCTCAT CGCCGCCGTC ATCGTCGCCG CCGTCACAGC ACTCGGTACC
AAGGTAAGCG CGACCTTCTC GTACATCGAC TCCAAGATGC CCACCCCCGG CCAGTAA
 
Protein sequence
MNAIMQRLFK EETGATALEY GLIAALIAAV IVAAVTALGT KVSATFSYID SKMPTPGQ