Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1113 |
Symbol | |
ID | 4662568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1352892 |
End bp | 1353710 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639819342 |
Product | SAF domain-containing protein |
Protein accession | YP_966560 |
Protein GI | 120602160 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.376133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.153386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAGGA CGGCAGTGAT ACAGGTCATA GCGGCACTGG TGCTGGCCCT CGTGGCAGGC ATTCTGGTGT TCCGCTTCGT GCAGGTCAAC CGGGTGGCGC AGCAGACGCA GCAGCCCCCC GGAGTCGTGC TCGTCGTCTC CGCCGTCGAT ATGGAGAAGG GTGCGAAGAT ACGCGCCGAC CAGCTCAAGA CATCGACATT TCTCTCCGCA TCCGCCCCTC CCGGCGGATT CACGGATGCG AAGTCCCTCG TCGGCAGGGT GCTGGCAACC CCCGTCACGA CCGGTGAGGT CATCACCGAG ACCCGCCTGC TGCCCGCCGA CGCGACCTCC GGCGGGGTGA GCACCATGAT CGCCCCCGGA ATGCGCGCCG TGGCAGTCAA AGGCAACAAG GTCATGGGTC TTGCCGGGTT CATTCGCCCC GGCAACCGGG TCGACATCAT GGTCACCATC GACGACGAGA CCCGTGAGAA GGCCAAGGCG CGGACGAAGG TCATCCTCGC GGGCATCAAG GTGCTGGCTA CCGGCACCGA ACTGCGGCAG GAGGGAGACG ACACGGCGAC ATCGCCCGTG GAGGTCTACA CCCTCGAAGT CACCCCTGAA CAGGCCGAGC TGCTCTCGCT TGCCGCCTCA CGAGGCGAAC TGCACTTCGC GCTCCGCAAC CCCGCCGACG ACCTGCCCGT GCGGACGGCC GGCACCGACG TTCCGGCCAC GCTCAGGCAG TTGCAGGGTG GAGACAACGG CACCCCGCGC CGCGACCGGG GTTTCAAGGT CGAGATCATC TCCGGCACCG AACGGTCAAC GATGAGGATC GAACGATGA
|
Protein sequence | MRRTAVIQVI AALVLALVAG ILVFRFVQVN RVAQQTQQPP GVVLVVSAVD MEKGAKIRAD QLKTSTFLSA SAPPGGFTDA KSLVGRVLAT PVTTGEVITE TRLLPADATS GGVSTMIAPG MRAVAVKGNK VMGLAGFIRP GNRVDIMVTI DDETREKAKA RTKVILAGIK VLATGTELRQ EGDDTATSPV EVYTLEVTPE QAELLSLAAS RGELHFALRN PADDLPVRTA GTDVPATLRQ LQGGDNGTPR RDRGFKVEII SGTERSTMRI ER
|
| |