| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1109 |
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| Symbol | |
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| ID | 4662534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1347971 |
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| End bp | 1349797 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639819338 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_966556 |
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| Protein GI | 120602156 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.280352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0921606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCG CCGAACGCCT CATGCGCGCG ACACGACGCC AGCAGGAAAC GGACGACGTA
CCCGCCGCCC CGGTTCATGC GAGACGGGCC ACCGACCGCA TCGCCATGCC CGACACCCTG
CGTGGTGACA CCGGGACACA CGGGCCCGAG AACGCCCCTT CTTCGCACCT CGACGTCACC
ACGGCATCGG CCGGGCAACC GGACACGCAC AGCCAGACCG GCATGCCGTA CGATGTGGCG
GTCGATGGCC TGCACGTCCG GCCTCCGCAA GACGGCCCTG CATCCGGACT TTTCCAGACG
ACCAGCGACC AGCCCCCCAC CATTGCGGAC GGCGAGAACG ACGAGAACCC GATTCTGCCC
CCTGCGGCCA CCACGGCGGC ACCGCGACGC CCTGTGGTCG CGCCGTCGTC ATCAAGGCGC
ACGGACGACG CCACCGTGTC CCCCGCCGCT GCCGAAACAC AGGCAACCGC CCCGGCACAG
GCCGAGCAAC CCCTGCGGGC GGCCCGCAGC ACCCCCCGGG CCGCGGAACA GGTCGTGGAC
GTGAGCAAGC TCACCCTGCA CGGTGACCAC TATTACGAAA TCAAGGAACA TCTGCTCGAC
CGACTGCTTG AGCTTCTCGA CCTCGCCGCC GTGGAGTCGC TTCCCCCCGA ACGACTTGGC
GACGAGATTG GCCGCCTCGT CGAGAGGCTC ATGCGCGACG AGTTCAGGCA AGCCCCCCTC
AACGCCAGTG AACGCCGCCA GATAACCGGT GACATCCGCG ACGAGATCCT CGGCCTCGGC
CCGCTGGAAC CGCTGCTGCA CGACCCCACC GTCAACGACA TCCTCGTCAA CAACTACAGG
CAAATCTACG TCGAACGCCG CGGCAAGCTC ATCAAGGTCA ACACGCGCTT CCAGGACGAC
GACCACCTGC GCAAGATCAT CGACCGCATC GTCTCGCGCA TAGGCCGCCG AGTGGACGAA
TCGTCGCCCA TGGTCGACGC CCGCCTTGCC GACGGGTCGC GCGTCAACGC CATCATCCCG
CCTCTGGCGC TCGACGGACC CAGCCTGTCC ATCCGCCGCT TCTCGAAGGA CCCTCTGGAG
TTGCACGACC TCATCGGCTT CGGCGCCCTG ACGCCGGAGA TGGGCGAAGT GCTGCAGGGC
ATCGTCAAGG CGCGGCTGAA CATCATCGTC TCGGGCGGAA CAGGGTCGGG CAAGACCACC
ATGCTCAACT GCCTTTCGCG TTTCGTGCCG CACGACGAAC GCATCGTGAC CATCGAGGAC
GCCGCAGAAC TCCAGCTCAA ACAGGAGCAT GTGGTGCGCC TTGAGACACG GCCCGCCAAC
ATCGAGGGAC ACGGCGAGGT CACGGCCCGC GACCTTGTGA AGAACTGCCT GCGTATGCGC
CCCGACCGCA TCATCGTCGG CGAAGTCCGT AGCGGTGAAG TGCTCGACAT GCTGCAAGCC
ATGAACACCG GTCACGACGG GTCGCTGACG ACCATCCACG CCAACACCCC GCGAGACTGC
CTGATGCGCC TTGAGACCAT GGTCGCCATG GCAGGGCTGA ACATCAGCAC CCTTTCGCTC
AAACGCTACA TATCCTCCGC CGTGGACGTG ATCATACAGG TCTCACGCCT CTCGGACGGT
TCACGCAAGC TCACCAGCCT GATGGAACTG ACCGGCATGG AAGGCGAGGC CATCACCATG
CAGGAAATCT ACAGCTTCGA GCAGACCGGA GTGGACGACA AGGGCAAGGT TCAGGGGCAC
TTCCGCAGCG GCGGCATCAG GCCGAACTTC GCCCCGCGCC TAGCGGCCAT GGGCATCCAT
CTCGGCGGCA GCCTCTTCGA CGTCTGA
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| Protein sequence | MRLAERLMRA TRRQQETDDV PAAPVHARRA TDRIAMPDTL RGDTGTHGPE NAPSSHLDVT
TASAGQPDTH SQTGMPYDVA VDGLHVRPPQ DGPASGLFQT TSDQPPTIAD GENDENPILP
PAATTAAPRR PVVAPSSSRR TDDATVSPAA AETQATAPAQ AEQPLRAARS TPRAAEQVVD
VSKLTLHGDH YYEIKEHLLD RLLELLDLAA VESLPPERLG DEIGRLVERL MRDEFRQAPL
NASERRQITG DIRDEILGLG PLEPLLHDPT VNDILVNNYR QIYVERRGKL IKVNTRFQDD
DHLRKIIDRI VSRIGRRVDE SSPMVDARLA DGSRVNAIIP PLALDGPSLS IRRFSKDPLE
LHDLIGFGAL TPEMGEVLQG IVKARLNIIV SGGTGSGKTT MLNCLSRFVP HDERIVTIED
AAELQLKQEH VVRLETRPAN IEGHGEVTAR DLVKNCLRMR PDRIIVGEVR SGEVLDMLQA
MNTGHDGSLT TIHANTPRDC LMRLETMVAM AGLNISTLSL KRYISSAVDV IIQVSRLSDG
SRKLTSLMEL TGMEGEAITM QEIYSFEQTG VDDKGKVQGH FRSGGIRPNF APRLAAMGIH
LGGSLFDV
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