Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1102 |
Symbol | |
ID | 4662837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1339904 |
End bp | 1342375 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639819331 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_966549 |
Protein GI | 120602149 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.813916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.354207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGCGA ACGCCAGAGA TGCACGACGC CGGAACCGTT CGGCCACTGG CAGGAACAGT TCAGGCAGCC CTGGCGGTGC ACAGGCCGTG GTGCCCGCTG CCGCCCCTCC GCGTCACGCC CATGCGGGAA CGGAACCGGC GCGGGCGACC ACGATGAGCC TGCTCGCCGT CGCCCCGGAA GAGGACATAC ACGCCCTTGC CCGCACCCTG CACCATGCGG GCATCGCAGC CGCCTATACC CTTGCCACGA CGCCGCACAC ACTGTCGTCA GCCCTCATCG ACGAACCGTG GGACATGGTG CTGGTCCGCC CCGGCTTGCC GGGTCTTAGC CCGACCGACG CCCTGCATCT CGCGCGGGCG GCACGCAGCG ACTTGCAGTG TGTCGCCCTG CTGCACCGGG AAGAGACCGA AAGCGCAATG GCTCTTCTGA AGGGCGGCAT GGACGATGTC GTCGTCGCAG ACGACCCCAT ATTGCCTGCG CACATGGCCC GCCTCGCCCG CGAGGCGGCA CGCAGGCGCG AACACTCGCG CCTGTGGCGT GACATGCGCC ATGACGTCCA GCAATGGCGA GGCATGGTCG ACAACACCCT GCTGGGCATC TTCCGCTGCC AGCCATGGGG CGACCTTGTG CATGCCAACG CCGCCTTCGC CCACATCCTC GGGCACGACG ACCCCGCAGC ACTCGTACAG CAACTCCGCA CGGAGAATCG TTCCTTTCTC GACAAGAACC GGATGGAGCA CTTCCTCTCC CGGCTTTCCG AACGAGACTG CATCGACGAC TTCGAAGCCG ACCTCCATAA GGTCGACGGT ACGTTGACCC GGGTCATGCT CCATGCACGC ATCATCCGCG ACGACAACGG CGAAGCCCTC TCCATCGAAG GCACGATGGA AGACATCGAG CGGCGCAAAT CGTTCGAAGC GGTCATCATC AATGCCAAAC AGGAGTGGGA GAAGACGTTC GACAGCGTTC CCGACGTCAT CATCATCTTC TCACCGGAAT TGCGGATACG GCGGTGCAAC AAGGCACTGG GCCGCCTGCT GGGCCTTCAC CCGCGCGACC TCGTGGGACG GCGCTGTGAA GAGGTGCTCG GTTCCGGCAG TTCTCCGAAC GATGCCTGCG CGTTGCTGCG TTCGCAAGAG AGTGCCGGTT TCAGCACCGG TGAACTGCAC CTGCCCTTTC TTGGCGGCGA CTTTCTCGTG ACCCTCTCGC CACTGCAAAC GGGACAGAAC GACGAACCCG CCGGGGACAT CGTCATGGTC GCCCACGACA TCAGCAACCG CAAACGCCTC GAAAGCCAGC TGCGGCAGGC GCAGAAGATG GAGGCCATCG GCACGCTGGC AGGTGGCATC GCCCATGACT TCAACAACAT CCTTGGCGTC ATGATGGGCT ACACGGAGAT GAGTCTCGAC CAGGCGGATG AGGACAGCCC CATGCACAGA AGGCTGAGTG AAGTGCTCGA AGCCGGCAAG CGGGCGCGAG ACATCATCCA CCAGATACTC ACCATGAGCA GACAGGAAGA ACCTTCGCGG CAGATGCTCT CGCTTTCGTC TCCCGTGCGC GAGACCCTGC GCCTTCTGCG GGCGACACTC CCCGCCAACG TCGACATCCG GGTGGATATC GAGGATACCG CCCCCGTCCT CGCCAACCAG AGTCAGATAC AGCAGGTCGT CATGAATCTC TGCACCAACG CCGCCCACGC CATGCGCGCG AAGGGCGGGG TGCTCACCGT GGCACTCGAC GCCGTCGACC TGAGTGCCGA AGAGGCCCAG CAACGCTCTC TCGAAGGCCC CGCGACCTTT GCCCGCCTAC GGGTACGCGA CACAGGGCAC GGTATCCCCT CGGAGATACG CGAGAACATC TTCGACCCGT TCTTCACCAC CAAGAAGCCG GATGAGGGAA CGGGCATGGG GCTTGCCCTT GTCCACGGCA TCGTCACCGG ACACGGCGGG CATGTATCGT TCACCTCCAC GGCGGGTTTC GGCACCGAAT TCGAGATACT TCTCCCTGTC GTCTCCGGCC ATGCGACGAA GGCGGAAGGA GACCCGGACA ACCTGCCCAA GGGGGGGGGC GAAGTGCTGG TGGTCGACGA TGAGGCGTCC CTTGCCCTCG TCATGGGCGA GATGCTCGAA AGCATGGGCT ACAGGGCTGA CATCGCCACA TCACCTTTCG AAGCCCTCGA ACGTTTCTCC GAGTCGCCGT CACGATGGGC CTTCGTGGTC ACCGACCAGA CCATGCCCGG CATGACCGGC ATGGAACTCG CCGCCCATAT GCTGGGCGTC GCATCCAGCA TCCGGGTCAT CCTGTGTACG GGGTTCAGTG AGGGACTGAC GGAAGAGGCG GCACACAAGG CAGGCATAGC GAGACTGCTG TACAAGCCCG TCCTGCGCGC CGACATGGCA GAGGCGGTGA TGGGCCTTGC GGTGTCAGCG GGGCAGGGCG AGTCGTCCGA AGCCCCGGTC ACCGTGGCAT GA
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Protein sequence | MTANARDARR RNRSATGRNS SGSPGGAQAV VPAAAPPRHA HAGTEPARAT TMSLLAVAPE EDIHALARTL HHAGIAAAYT LATTPHTLSS ALIDEPWDMV LVRPGLPGLS PTDALHLARA ARSDLQCVAL LHREETESAM ALLKGGMDDV VVADDPILPA HMARLAREAA RRREHSRLWR DMRHDVQQWR GMVDNTLLGI FRCQPWGDLV HANAAFAHIL GHDDPAALVQ QLRTENRSFL DKNRMEHFLS RLSERDCIDD FEADLHKVDG TLTRVMLHAR IIRDDNGEAL SIEGTMEDIE RRKSFEAVII NAKQEWEKTF DSVPDVIIIF SPELRIRRCN KALGRLLGLH PRDLVGRRCE EVLGSGSSPN DACALLRSQE SAGFSTGELH LPFLGGDFLV TLSPLQTGQN DEPAGDIVMV AHDISNRKRL ESQLRQAQKM EAIGTLAGGI AHDFNNILGV MMGYTEMSLD QADEDSPMHR RLSEVLEAGK RARDIIHQIL TMSRQEEPSR QMLSLSSPVR ETLRLLRATL PANVDIRVDI EDTAPVLANQ SQIQQVVMNL CTNAAHAMRA KGGVLTVALD AVDLSAEEAQ QRSLEGPATF ARLRVRDTGH GIPSEIRENI FDPFFTTKKP DEGTGMGLAL VHGIVTGHGG HVSFTSTAGF GTEFEILLPV VSGHATKAEG DPDNLPKGGG EVLVVDDEAS LALVMGEMLE SMGYRADIAT SPFEALERFS ESPSRWAFVV TDQTMPGMTG MELAAHMLGV ASSIRVILCT GFSEGLTEEA AHKAGIARLL YKPVLRADMA EAVMGLAVSA GQGESSEAPV TVA
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