| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1098 |
|---|
| Symbol | |
|---|
| ID | 4662930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1336161 |
|---|
| End bp | 1337900 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639819327 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_966545 |
|---|
| Protein GI | 120602145 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2855] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.509679 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGA ATGAAAGCAA TGTCGTTGTC GACCAGGGGC AGACGAAGCT GTCCGACCTG
TGGACCAAGG AGGATTACTG GGCCATCTGG CTCGGGTTCG TCATCCTTAT TGCGGGGATG
TGGCTGTTTC TCGCCAACCC GTCCCCCGAA TTCGCCCAGA AGGTGGATAA GGCCAACGGT
GTGATGGCTG CAGAGGCTGC GCGCGCCCCC TTCAAGACCC TAGCCTACTA CAAGGCGCAG
GACGACAAGG GGAAGCTCCA GGGTATGGAT ACTCCATCGG GTAAGGCTAT AGGTGCTTTC
CTGACGACAC CCGGTGCCTG GGCGTCCGAC CCTCTCGAAG CCTTCGTGCT TTCCAAGGAG
GCTGCCGACG AGCGTAACGC GGCTGCCAAG GCCAAGTTCG AGTCTGCCAA GGTCAAGTCG
GATGCCGCAC TGGCGGTTGC GCAAGCCGCA GAGGCCGCCG CAGCAGGGGC AGCATTCGCC
GATGCCGCGC TCAACACCGA AGCGCAGGCG AAGATTGCCG AATGGCGTGC CGAGCATGCC
AAGATGAAGG CTGCTGAGAA GAAGACGAAG ACCAAGCCGT TCAACATCGC CACATCACTG
CCCATGCTCA TGGTCGCCCT CGGGCTGTTC TTCGCCGTGG GCATGAAGTT CATGGGCCAT
GATGTGCCCA AGTTCCTCGT GGGATTCATC GGTGTGTTCT TCGTGGCGGT GCTGGCACTC
ATGATGGGGC ATCAGAGCAC CATGAAGTAC TGGGGCATCG GTGCCGAGGC ATGGGCCATC
ATCATCGGGA TGCTGGTCGC CAACACCGTG GGAACACCGA GTTTCATCAA GCCCGCTCTT
CAGGTCGAAT ACTACATCAA GACCGGTCTC GTGCTGCTGG GTGCGGAGGT GCTGTTCGAC
AAGATCATCG CCATCGGCAT TCCCGGCATC TTCGTGGCGT GGGTGGTCAC CCCCATCGTG
CTCATCTGCA CCTTCATCTT CGGGCAGAAG ATTCTCAAGA TGCCTTCCAA GACGCTCAAT
ATCGTCATCT CCTCCGACAT GTCGGTGTGC GGCACCTCCG CTGCCATCGC CACGGCGGCC
GCCTGCCGTG CCAAGAAGGA GGAACTCACC CTTGCAATCG GTCTGTCGCT GGTGTTCACC
GCCATCATGA TGATCGCCAT GCCCGCCTTC ATCAAGGCCG TGGGTATGCC GCAGGTTCTT
GGGGGGGCGT GGATGGGCGG AACCATCGAC GCCACGGGTG CGGTGGCTGC CGCCGGGGCG
TTCCTCGGTG AGAAGGCCCT GTACGTGGCC GCCACCATCA AGATGATCCA GAACGTGCTC
ATCGGCGTGG TCGCCTTCGG TGTGGCCGTG TACTGGTGCG CCCGTGTGGA ATGCAGGGAA
GGGCACAGCG TGGGCTGGAT CGAAATCTGG CACCGCTTCC CCAAGTTCGT GTTGGGCTTC
CTTGCCGCTT CGGTTCTCTT CTCGGTCATA TCCGGCAGCC TCGGTTCCGA CATGAGCCAG
ATCATGGTCA ACCAGGGTGT TCTGAAGGGC CTGTCGTCGC CGCTGCGCAA CTGGTTCTTC
TGCCTTGCGT TCACGTCCAT CGGTCTGGCC ACGAACTTCC GGGAACTTGC GCACTACTTC
AAGGGCGGCA AGCCGCTCAT CCTGTACGTG GCCGGGCAGA GCTTCAACCT CGTACTGACG
CTGGCCATGG CCTACGTCAT GTTCTACATC GTGTTCCCCG AGATCACGGC GAAGATATAG
|
|---|
| Protein sequence | MAENESNVVV DQGQTKLSDL WTKEDYWAIW LGFVILIAGM WLFLANPSPE FAQKVDKANG
VMAAEAARAP FKTLAYYKAQ DDKGKLQGMD TPSGKAIGAF LTTPGAWASD PLEAFVLSKE
AADERNAAAK AKFESAKVKS DAALAVAQAA EAAAAGAAFA DAALNTEAQA KIAEWRAEHA
KMKAAEKKTK TKPFNIATSL PMLMVALGLF FAVGMKFMGH DVPKFLVGFI GVFFVAVLAL
MMGHQSTMKY WGIGAEAWAI IIGMLVANTV GTPSFIKPAL QVEYYIKTGL VLLGAEVLFD
KIIAIGIPGI FVAWVVTPIV LICTFIFGQK ILKMPSKTLN IVISSDMSVC GTSAAIATAA
ACRAKKEELT LAIGLSLVFT AIMMIAMPAF IKAVGMPQVL GGAWMGGTID ATGAVAAAGA
FLGEKALYVA ATIKMIQNVL IGVVAFGVAV YWCARVECRE GHSVGWIEIW HRFPKFVLGF
LAASVLFSVI SGSLGSDMSQ IMVNQGVLKG LSSPLRNWFF CLAFTSIGLA TNFRELAHYF
KGGKPLILYV AGQSFNLVLT LAMAYVMFYI VFPEITAKI
|
|---|
| |