Gene Dvul_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1085 
Symbol 
ID4662921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1319393 
End bp1320787 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content64% 
IMG OID639819314 
Producthypothetical protein 
Protein accessionYP_966532 
Protein GI120602132 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.792914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAT CCTTCGTCGG AGAAGGCTTC GCCATCCTGT TGCTCATTCT GCTCAACGGT 
TTCTTCGCCC TTGCCGAGAT GTCGCTGGTC ACTTCACGCA AACCGCGCCT CGAAGCGGAA
GCCGCACGCG GCAACAGGGG GGCCGCAGTG GCCCTGCGGC TTCTTGAAAC GCCCGACAGC
CTCTTCTCCA CGGTACAGAT AGGTATCACC CTCATCGGCA TTCTCACAGG TGCCTTCGGC
GGCGCGTCTG TGGCTGCGCA CCTGACCCAC GTGCTGGCGG ACATGCCTGC CGTGGCCCCC
TACGCGGCAT CTCTGGCTTT CGGGGTGGTC ATCATCGTCA CCACCTACCT GACGCTCATC
TTCGGTGAAC TCGTGCCCAA GAAGATGGCC TTCGCCTCTC CTGAACGTTT CGCGTGCGCC
GTCGCCCCCG TCATGCTGGT GTTCATGCGG CTTTCCATGC CCGCGGTGTG GCTGCTCAGT
CTCTCGGCGC GTGCGGCCTC CACCATACTT CGTATCCGCG AGGACGGGCC TTCCGTCACC
GATGAGGATA TACGGGGGAT GCTCGCCGAA GGTGTGCGTT CCGGCGTGGT ACTCGACGCG
GAACGCACCA TGTCCGAACG CGTCATGCGC CTTGGCGACC GTAGCGTGAC GTCCATCATG
ACGCACCGCA CCCGCGTGGC GTGGCTCGAC AGCGAAGCGC CGCAGGAGGA CATCATCGAA
CGTCTTGCCG CCTCGACCTA CTCGCGCTTT CCGGTGTGCG ACGGCGACCT CGACAACGTC
CTCGGGGTCA TCAAGGCGCG CGAATACCTC GCTGCCTGCG CGGAAGGGGC CGACGTGACG
CTCAAGAACT TCATGCGCCA ACCCGTCTTC ATTCCTGAAA CGGCCCGTGC GCTCGACCTG
CTTGAAGCCT TCCGCACCAC CCCGCATGTC CACTTCGCCA TGGTGGTGGG CGAATACGGC
GAGGTGCAGG GCATCGTCAC CCTCAACGAC GTGCTCGAAG CCATCGTGGG CGACATCCCG
AGCCCCGACG AGGCCGATGA GCCCGAAGCC GTCCGCCGCG CCGATGGTTC ATGGTTGCTG
GATGGCATGA TGCACATCGA TGACATGGCC GATGTGACGG GTCTGCGCCT GCCCGACGAA
AAGCATGGAG ACTTCGAGAC GCTGGCAGGT CTTCTGCTGC AACACCTCGG CAAGCTGCCC
GCCATCGGCG ACACGTTGCG TCTGGGGCCC CTGCATTTCG AAATCGTCGA CATGGACGGA
CGACGCATCG ACCGCGTGCT GCTCAGCACC GCTGCTACCT TGAAGGATGA ATACGCACCC
GGCACCGATA CCGCAGCGCA GAAGTCCGCC ACCGATGCAG CCCCCCCGAA AGGCGGCAGC
AATCCCGCCG CATGA
 
Protein sequence
MSTSFVGEGF AILLLILLNG FFALAEMSLV TSRKPRLEAE AARGNRGAAV ALRLLETPDS 
LFSTVQIGIT LIGILTGAFG GASVAAHLTH VLADMPAVAP YAASLAFGVV IIVTTYLTLI
FGELVPKKMA FASPERFACA VAPVMLVFMR LSMPAVWLLS LSARAASTIL RIREDGPSVT
DEDIRGMLAE GVRSGVVLDA ERTMSERVMR LGDRSVTSIM THRTRVAWLD SEAPQEDIIE
RLAASTYSRF PVCDGDLDNV LGVIKAREYL AACAEGADVT LKNFMRQPVF IPETARALDL
LEAFRTTPHV HFAMVVGEYG EVQGIVTLND VLEAIVGDIP SPDEADEPEA VRRADGSWLL
DGMMHIDDMA DVTGLRLPDE KHGDFETLAG LLLQHLGKLP AIGDTLRLGP LHFEIVDMDG
RRIDRVLLST AATLKDEYAP GTDTAAQKSA TDAAPPKGGS NPAA