Gene Dvul_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1010 
Symbol 
ID4663156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1241632 
End bp1243473 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content64% 
IMG OID639819233 
ProductGTP-binding protein TypA 
Protein accessionYP_966457 
Protein GI120602057 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCACTT TTGTACGCAA CGACCGGCTG CGGAACGTGG CCATCATCGC CCACGTCGAC 
CACGGCAAGA CCACGCTCGT CGACGCACTG TTCCGCCAGA GCGGCGTTTT CCGCGCCGAC
CAGCAGGTCG ACGACCGCGT CATGGACCGC ATGGACCTCG AACGCGAACG AGGCATCACC
ATCGCGGCGA AGAACTGCGC CGTCACATGG GGCGACACCA AGATCAACAT CATCGACACC
CCCGGTCACG CCGACTTCGG CGGCGAAGTG GAGCGCGCGC TCTCCATGGC CGACGGTGCC
GTCCTGCTTG TCGACTCCTC CGAAGGGCCG CTGCCCCAGA CCCGTTTCGT TCTCCGCAAG
ACCCTCGAAG CCGGTCTGAA GGTCATCGTG GTCATCAACA AGATCGACCG CAAGGACGCC
CGCGTTCAGG AAGTGCTGAA CGAGGTCTAC GACCTGTTCA TCGACCTCGA CGCCACCGAG
GAACAGCTCG AATTTCCCGT CCTGTACGCC ATCGGGCGCG ATGGCGTCGC CATGCGCTCG
CTCGACGACC CGCGCGAAAG CCTCGCGCCG CTGTTCGAGA CGCTGGTGTC GGTCATCCCC
GGCCCCGAAT ACGACCCCGA AGAGCCGTTC CAGATGCTCG TGGCCGACCT CGACTACTCC
GACTATCTCG GCCGACTCGG CGTGGGTCGC GTCCGCCATG GCTCCGCCAC CGCCAAGGAC
GCCCTCGTCT ACATCGGCCC CGATGGCACG GCCCGTTCCG CCCGCGTGAC CCGTATGCAG
GCATACGAAG GTCTGCAACT GCGCGACCTC GACGTGGCCC AGCCCGGTGA GATCGTGGTG
CTTGCAGGCA TCGAGGACAT CACCATCGGC GACACCATCT GCACCCGCGA CGCCCAGCGG
GTACTGCCCC GCATCCGCGT CGACGAACCC ACCGTGGCCA TGCGCTTCAC CATCAACACC
TCGCCGCTCG CCGGGCGCGA GGGCAAGAAC GTGCAGTCAC GCAAGATTCG CGACCGTCTC
ATGAAGGAGA CGCTGCGCAA CGTGGCCGTA CGCGTGGACG AAGCCGAAGA GAAGGACAGC
TTCATCGTCA AGGGACGTGG CGAGTTCCAG ATGGCCATCC TCATCGAGAC CATGCGCCGT
GAAGACTTCG AACTGTGCGT GGGCCGTCCC GAAGTCATCT TCCACCGCGA AGGCGACCAG
CTGCTCGAGC CCGTCGAGCA CCTGTACGTC GACTGCGACG AGGGCTTCAT GGGCGTCGTC
ACCGAAAAGA TCACCCAGCG CAAGGGCCGT ATGCTCAACT GCGTGAACAA CGGCACCGGG
CGCGTACGTC TCGAGTACTC GGTCCCCTCG CGCGGGCTCA TCGGCTACCG TGACGAGTTC
CTGACCGACA CCAAGGGCAC GGGCATCATG AACTCGCTGC TTTCGGGCTA TGAGCCCTAC
CGCGGCGACT TCCCCTCGCG CTTCACCGGT TCCATCGTGT CAGACCGCGC GGGTAACGCC
GTTGCCTATG CCCTCTTCAA CCTCGAACCG CGCGGCGAGA TGTTCGTCGT ACCGGGCAAT
CCGGTGTACG AGGGCATGAT CGTCGGGGAA CACAACCGCG ACAACGACAT CGACGTCAAC
CCCACCAAAG AGAAGAAGCT CACCAACATG CGCGCTTCGG GCAAGGACGA GAACGTCATC
CTCACCCCCG TACGTCCCAT GACGCTGGAA CGCGCCCTGC GGTTCGTCCG TGAAGACGAA
CTGGTGGAAG TGACGCCGCA GTCCATCCGC CTGCGCAAGG CCGAACTTTC GGCGCAGAAG
CGCTATCAGG CCGGGGCTGC CAAGAAGAAG GCCTCCGCCT AG
 
Protein sequence
MSTFVRNDRL RNVAIIAHVD HGKTTLVDAL FRQSGVFRAD QQVDDRVMDR MDLERERGIT 
IAAKNCAVTW GDTKINIIDT PGHADFGGEV ERALSMADGA VLLVDSSEGP LPQTRFVLRK
TLEAGLKVIV VINKIDRKDA RVQEVLNEVY DLFIDLDATE EQLEFPVLYA IGRDGVAMRS
LDDPRESLAP LFETLVSVIP GPEYDPEEPF QMLVADLDYS DYLGRLGVGR VRHGSATAKD
ALVYIGPDGT ARSARVTRMQ AYEGLQLRDL DVAQPGEIVV LAGIEDITIG DTICTRDAQR
VLPRIRVDEP TVAMRFTINT SPLAGREGKN VQSRKIRDRL MKETLRNVAV RVDEAEEKDS
FIVKGRGEFQ MAILIETMRR EDFELCVGRP EVIFHREGDQ LLEPVEHLYV DCDEGFMGVV
TEKITQRKGR MLNCVNNGTG RVRLEYSVPS RGLIGYRDEF LTDTKGTGIM NSLLSGYEPY
RGDFPSRFTG SIVSDRAGNA VAYALFNLEP RGEMFVVPGN PVYEGMIVGE HNRDNDIDVN
PTKEKKLTNM RASGKDENVI LTPVRPMTLE RALRFVREDE LVEVTPQSIR LRKAELSAQK
RYQAGAAKKK ASA