Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1010 |
Symbol | |
ID | 4663156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1241632 |
End bp | 1243473 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639819233 |
Product | GTP-binding protein TypA |
Protein accession | YP_966457 |
Protein GI | 120602057 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCACTT TTGTACGCAA CGACCGGCTG CGGAACGTGG CCATCATCGC CCACGTCGAC CACGGCAAGA CCACGCTCGT CGACGCACTG TTCCGCCAGA GCGGCGTTTT CCGCGCCGAC CAGCAGGTCG ACGACCGCGT CATGGACCGC ATGGACCTCG AACGCGAACG AGGCATCACC ATCGCGGCGA AGAACTGCGC CGTCACATGG GGCGACACCA AGATCAACAT CATCGACACC CCCGGTCACG CCGACTTCGG CGGCGAAGTG GAGCGCGCGC TCTCCATGGC CGACGGTGCC GTCCTGCTTG TCGACTCCTC CGAAGGGCCG CTGCCCCAGA CCCGTTTCGT TCTCCGCAAG ACCCTCGAAG CCGGTCTGAA GGTCATCGTG GTCATCAACA AGATCGACCG CAAGGACGCC CGCGTTCAGG AAGTGCTGAA CGAGGTCTAC GACCTGTTCA TCGACCTCGA CGCCACCGAG GAACAGCTCG AATTTCCCGT CCTGTACGCC ATCGGGCGCG ATGGCGTCGC CATGCGCTCG CTCGACGACC CGCGCGAAAG CCTCGCGCCG CTGTTCGAGA CGCTGGTGTC GGTCATCCCC GGCCCCGAAT ACGACCCCGA AGAGCCGTTC CAGATGCTCG TGGCCGACCT CGACTACTCC GACTATCTCG GCCGACTCGG CGTGGGTCGC GTCCGCCATG GCTCCGCCAC CGCCAAGGAC GCCCTCGTCT ACATCGGCCC CGATGGCACG GCCCGTTCCG CCCGCGTGAC CCGTATGCAG GCATACGAAG GTCTGCAACT GCGCGACCTC GACGTGGCCC AGCCCGGTGA GATCGTGGTG CTTGCAGGCA TCGAGGACAT CACCATCGGC GACACCATCT GCACCCGCGA CGCCCAGCGG GTACTGCCCC GCATCCGCGT CGACGAACCC ACCGTGGCCA TGCGCTTCAC CATCAACACC TCGCCGCTCG CCGGGCGCGA GGGCAAGAAC GTGCAGTCAC GCAAGATTCG CGACCGTCTC ATGAAGGAGA CGCTGCGCAA CGTGGCCGTA CGCGTGGACG AAGCCGAAGA GAAGGACAGC TTCATCGTCA AGGGACGTGG CGAGTTCCAG ATGGCCATCC TCATCGAGAC CATGCGCCGT GAAGACTTCG AACTGTGCGT GGGCCGTCCC GAAGTCATCT TCCACCGCGA AGGCGACCAG CTGCTCGAGC CCGTCGAGCA CCTGTACGTC GACTGCGACG AGGGCTTCAT GGGCGTCGTC ACCGAAAAGA TCACCCAGCG CAAGGGCCGT ATGCTCAACT GCGTGAACAA CGGCACCGGG CGCGTACGTC TCGAGTACTC GGTCCCCTCG CGCGGGCTCA TCGGCTACCG TGACGAGTTC CTGACCGACA CCAAGGGCAC GGGCATCATG AACTCGCTGC TTTCGGGCTA TGAGCCCTAC CGCGGCGACT TCCCCTCGCG CTTCACCGGT TCCATCGTGT CAGACCGCGC GGGTAACGCC GTTGCCTATG CCCTCTTCAA CCTCGAACCG CGCGGCGAGA TGTTCGTCGT ACCGGGCAAT CCGGTGTACG AGGGCATGAT CGTCGGGGAA CACAACCGCG ACAACGACAT CGACGTCAAC CCCACCAAAG AGAAGAAGCT CACCAACATG CGCGCTTCGG GCAAGGACGA GAACGTCATC CTCACCCCCG TACGTCCCAT GACGCTGGAA CGCGCCCTGC GGTTCGTCCG TGAAGACGAA CTGGTGGAAG TGACGCCGCA GTCCATCCGC CTGCGCAAGG CCGAACTTTC GGCGCAGAAG CGCTATCAGG CCGGGGCTGC CAAGAAGAAG GCCTCCGCCT AG
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Protein sequence | MSTFVRNDRL RNVAIIAHVD HGKTTLVDAL FRQSGVFRAD QQVDDRVMDR MDLERERGIT IAAKNCAVTW GDTKINIIDT PGHADFGGEV ERALSMADGA VLLVDSSEGP LPQTRFVLRK TLEAGLKVIV VINKIDRKDA RVQEVLNEVY DLFIDLDATE EQLEFPVLYA IGRDGVAMRS LDDPRESLAP LFETLVSVIP GPEYDPEEPF QMLVADLDYS DYLGRLGVGR VRHGSATAKD ALVYIGPDGT ARSARVTRMQ AYEGLQLRDL DVAQPGEIVV LAGIEDITIG DTICTRDAQR VLPRIRVDEP TVAMRFTINT SPLAGREGKN VQSRKIRDRL MKETLRNVAV RVDEAEEKDS FIVKGRGEFQ MAILIETMRR EDFELCVGRP EVIFHREGDQ LLEPVEHLYV DCDEGFMGVV TEKITQRKGR MLNCVNNGTG RVRLEYSVPS RGLIGYRDEF LTDTKGTGIM NSLLSGYEPY RGDFPSRFTG SIVSDRAGNA VAYALFNLEP RGEMFVVPGN PVYEGMIVGE HNRDNDIDVN PTKEKKLTNM RASGKDENVI LTPVRPMTLE RALRFVREDE LVEVTPQSIR LRKAELSAQK RYQAGAAKKK ASA
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