| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1003 |
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| Symbol | |
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| ID | 4663081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 1234457 |
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| End bp | 1235902 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639819227 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_966451 |
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| Protein GI | 120602051 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.861392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTC CTGTGGTGCC GGGTTACTGT TCGTCGCCCT GTGGGGGGCT TTCACCGCAG
AGGCACAACA GAGGTGGTCT GCGCTGGCTG GCGTCTACAT TCGCCGTGCT GCTGGCGTTG
TGCCTCACCG TGGCCTCTGC GCAATGCGCC TCTGCCAACG CCACGGTCGA AGCCATGGCG
GGACAGATGC TCATGCTCGG CTTCCGTGGG GCCGAACCTG CGGATGCAGG CCCCATCCTT
CGCAGCATCG CCGCAGGGCA TGTGGGTGGC GTCATCCTGT TCGACAGGGA TATGGACCCG
TCGGTGCGGG TGCGCAACAT CGTCTCCAAA GAGCAGTTGA GCCGTCTGAC GGGGGCGTTG
CAGGCGGCGG CCCCGGTTCC CCTGTTCATC GCCGTCGACC AGGAGGGCGG AAGGGTGCGA
CGCCTGAAGC CCGAGTACGG GTTCTTCGCC TATCCTTCTG CGGCGTCTCT CGGCAAGGGC
AGCCCGGAGG ATACGCGTCG CATGGCGTCC ACGCTCGCCA CGGAGATGGC GGAGGTGGGA
CTCAACGTGG ATTTCGGGCC GGTGGTCGAC CTTGCCGTCA ATCCGTCGAA CCCTGTCATA
GCCCGCCTCG AACGCAGTTA TGGCAGCGAC CCGTGCCGCG TGGCGTCCCA TGCCGCAGCT
TTCGTCAACG GGCTGGCATG GCGCGGTGTT GTGGCTTCTC TCAAGCATTT TCCGGGGCAT
GGCAGTTCGT TGCAGGACTC GCATCTTGGC GTCACCGACA TCTCGTCCAC ATGGCGGCGC
GAAGAACTCG GCCCCTATGC CCTTCTCCTG CGCGACGACT GGGCGGGCAT GGTCATGGTG
GGTCATCTCT ACAACAACCG CATCGATGCG GCGCATCCTG CCACGCTGTC ACAACGCACC
ATCGACGGAC TGCTGCGGCG CGACCTCGGC TGGAAGGGCG TCGTGGTGAC GGACGACCTG
CAGATGGGCG CCATCACCGC CCGTTATTCC CTCGACGAGA CCGTGCGTCT CGCCGTGGAG
GCTGGGGCCG ACATCCTGCT CTTCGGCAAC AATCTCGTAT GGGACGAGGG GCTTGCCGAG
AAGGTCCATG CCACGCTCGT GCGTCTCGTG CGTGAGGGCA AGGTGTCCGA ACAAAGGCTG
CGGCAATCGT GGGAACGTAT CATGCGACTC AAGTCCGTGC TTACGGTGGC ATCACCCGGC
GCCATCGCGC AGGGAGATTC TTCAGGCACT GCCATCGCCC CCGTCCCTGC CGTGCCCGAC
CCGACTGGCG CGCCGCGCCC CCTGCGTCTC ACTCTGCCCA TGCCGCGCGG CGATGAGCCG
TTGTGCCGCG ACCGCGACAC GCTGCAACGC GACCCCTTCG ACGACAGACA GGGTGCGCGC
TACGGGCGCG GTACGGGCAT CGGCATCGGC GTCGGGACCG GCACTGGCAT CGGCATCGGG
CAGTGA
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| Protein sequence | MTVPVVPGYC SSPCGGLSPQ RHNRGGLRWL ASTFAVLLAL CLTVASAQCA SANATVEAMA
GQMLMLGFRG AEPADAGPIL RSIAAGHVGG VILFDRDMDP SVRVRNIVSK EQLSRLTGAL
QAAAPVPLFI AVDQEGGRVR RLKPEYGFFA YPSAASLGKG SPEDTRRMAS TLATEMAEVG
LNVDFGPVVD LAVNPSNPVI ARLERSYGSD PCRVASHAAA FVNGLAWRGV VASLKHFPGH
GSSLQDSHLG VTDISSTWRR EELGPYALLL RDDWAGMVMV GHLYNNRIDA AHPATLSQRT
IDGLLRRDLG WKGVVVTDDL QMGAITARYS LDETVRLAVE AGADILLFGN NLVWDEGLAE
KVHATLVRLV REGKVSEQRL RQSWERIMRL KSVLTVASPG AIAQGDSSGT AIAPVPAVPD
PTGAPRPLRL TLPMPRGDEP LCRDRDTLQR DPFDDRQGAR YGRGTGIGIG VGTGTGIGIG
Q
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