Gene Dvul_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0973 
Symbol 
ID4662232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1196627 
End bp1198828 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content62% 
IMG OID639819196 
Producthistidine kinase 
Protein accessionYP_966421 
Protein GI120602021 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000797186 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTGCGTC TGAGGATTCT CACGGTCGTG GCGAACATCA TCGTCATCCT GCTCGGGGCG 
ATGACCTTCC GTGAGGCATG GCGCAATACG CTCTCGAACA TGGAAGTCGC GTCGACCAAC
ATAACGGTGA CGTTGGCTGA ACGCATCGGC GGCTACCTCG ACACGCTCGA TGTGGGGCTG
CTGGGACTCG CCGGGGAGAC CCGGCGCCAT GAGGGGGACA ACGCAAGGCA GGCACTGCCC
GACGTGTTCA GCCGGTTCAT CGATCATCTG CCCCTTGTGG ACAACCTGCT CTATGCGGAC
GCCTCGGGTG AGGTCGTGCT CGACTGCAAC GGGCTGTTAC AGCAGCGGGT GCATATCGGA
GACCGTGTCT ATTTCAGGAA TCTGCGTGCG GGGGCGACTC GCATGGAGGT CTCGGAACCC
ATCGAGGGGC GCCTGAGTGG CAAGAGGGTC ATCAGTGTTG CACGTCGGGT CACCGATGGT
GAAGGCGTCT TCATGGGGGT GGTGCTGGCT ACCATACCAC TGGAACGGTT CAGCGAATTG
TTTCAGGGCA TAGACATCGG CCCCAATGGT CACATCTCGT TCTTGCGCCA GGGCTTCATC
ATGCTCACCC GTGTGCCGCC CCTGCCGCCG GAGATGGATG TCACACCGGG AAGATTCGGA
GCACAGCCGG TGCGGGAAGC CATTCAGGGA GGCAGTGAGG CGGGTGTGGT GCGAACAGTG
TCCCATGTGG GGGGGCTTGA GAAGATATTC TCGTATCGCA AGGTGGGGCA CCATCCGTTC
TGGGTGGTCG TGGGACTGGC GCTTGATGAC GCCATACAGC CGTGGTTCCG CAATGCCGCC
TATGTGGCCG TCATCGTCGT CGCGTTTGTG GTCTTCACGG CGTTGTCGTC GCGCTCCCTG
CGGCGTGCCC TCCAGCAGGA GGTGGCGGCC CGCAATGCGG TGGAACGGGC ACGCAATGAA
CTGGAGACGC GTGTCGCTGA ACGAACGGCC CTGCTTGAGG ACTCCAATCT CCATCTGCGT
GAGGCCAAGG AGAAGGCCGA TAACGCGAAC GCGGCCAAGA GTGCGTTCCT CGCCAACATG
AGCCATGAGA TCCGTACGCC GCTCAATGGC CTTCTCGGTA TGCTCGACCT GCTCGAGGCC
ACGGGCCTTG ATGCCGGTCA GGCCGAATAT CTCGGCATGG CGAGACGTTC CGGGCGCAGG
CTCACCGACC TTTTGGGCGA CATCCTCGAT CTTTCGCGCA TCGAGGCGGG CAAACTCGTG
CTTGCCGAAC AGCCGTTCAC ACTTTCCGAT GTCCTTGCAT CCATTCGTGA GACCTTCGCA
CCCCTCTCCC GCGAGAAGGG ACTCCCGCTT GAGTTCGCCC TCGATGCGGT CCCGGGGCCC
TTTCTGGGCG ATGCCGTGCG GGTGCGCCAG ATACTGCTCA ACCTTGTGGG CAATGCCATG
AAGTTCACCA ACAGGGGGCA GGTGAAACTC GAGGTGAAGA CCCTTTTGCC CATGCCCGAT
GGGCGGGCGC GCATCCTGTT CATGGTGCAC GACTCCGGCT GCGGTATCCC GGAAGAACAG
GTGGGGTCCA TCTGCGAGCC CTTCACGCAG GTCGAGGCCC CGCTCACCAA GCGGTATCAG
GGAGTAGGAC TCGGTCTGGC CATAACGCGC ACGCTGGTAC ATGCGTATGA CGGTACGCTC
ACGGTCGATT CGCAGGTCGG TGTCGGTACT TCGGTGTATC TCACCCTCTG TCTGCCGCTG
GCGGCAGGCG ACGCCAAGGC CGCCGCGCCC GAGGTGAACC TGCCGCAGGA GGCCCCGCAG
GGGCTTCGGG TGCTCGTGGT AGAGGACGAC TCCGTGAACC TGTTCACAGT GCGCGTCATG
CTCGAAAGAA TGGGACACAC CGTGAGGACG GCCACTGACG GCGAACAGGC ACTGGCCGTG
CTTGTAGGCG CGCCGTTCGA CTGTGTGCTC ATGGACATCC AGATGCCCCA GATGGACGGG
ATGACCGCCG TGGGGCTGTT GCGTGCCTCG CACTGTGCCA ATGCCGATGT TCCGGTCGTG
GCGCTCACGG CGTACGTGAT GAACGGAGAC CGGGAGCGTT TTCTCGATGC CGGCATGGAT
GCCTATCTCG CCAAACCCAT TTCCATGCAT GCCCTTGGCG AAGTGCTGCG TCATATCCCT
CTGCTGCGTG CGAGAAGGAC GGGTGTGACG GACGGCGGGT AG
 
Protein sequence
MVRLRILTVV ANIIVILLGA MTFREAWRNT LSNMEVASTN ITVTLAERIG GYLDTLDVGL 
LGLAGETRRH EGDNARQALP DVFSRFIDHL PLVDNLLYAD ASGEVVLDCN GLLQQRVHIG
DRVYFRNLRA GATRMEVSEP IEGRLSGKRV ISVARRVTDG EGVFMGVVLA TIPLERFSEL
FQGIDIGPNG HISFLRQGFI MLTRVPPLPP EMDVTPGRFG AQPVREAIQG GSEAGVVRTV
SHVGGLEKIF SYRKVGHHPF WVVVGLALDD AIQPWFRNAA YVAVIVVAFV VFTALSSRSL
RRALQQEVAA RNAVERARNE LETRVAERTA LLEDSNLHLR EAKEKADNAN AAKSAFLANM
SHEIRTPLNG LLGMLDLLEA TGLDAGQAEY LGMARRSGRR LTDLLGDILD LSRIEAGKLV
LAEQPFTLSD VLASIRETFA PLSREKGLPL EFALDAVPGP FLGDAVRVRQ ILLNLVGNAM
KFTNRGQVKL EVKTLLPMPD GRARILFMVH DSGCGIPEEQ VGSICEPFTQ VEAPLTKRYQ
GVGLGLAITR TLVHAYDGTL TVDSQVGVGT SVYLTLCLPL AAGDAKAAAP EVNLPQEAPQ
GLRVLVVEDD SVNLFTVRVM LERMGHTVRT ATDGEQALAV LVGAPFDCVL MDIQMPQMDG
MTAVGLLRAS HCANADVPVV ALTAYVMNGD RERFLDAGMD AYLAKPISMH ALGEVLRHIP
LLRARRTGVT DGG