| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0956 |
|---|
| Symbol | |
|---|
| ID | 4662522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1174517 |
|---|
| End bp | 1175710 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639819179 |
|---|
| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_966404 |
|---|
| Protein GI | 120602004 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000351359 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.276703 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC TTTCCATCAG GAACCTGACC AAGATCTTCG GTCCACACCC CGAGAAGGCC
CTCGGTCTTC TCGAGCAGGG GCTTGGCAAG GAGGAAATCC ACCGCCGCAC AAGCCATGCC
GTGGGTGTCG ACCGTGCCTC CTTCGATGTG GAGGAGGGCG AGATCGTCGT GGTCATGGGT
CTCTCCGGCA GCGGTAAATC CACATTGGTA CGCTGCCTCA ACCGCCTCAT CGAACCCACG
GCCGGAACCG TCACCGTCGA CGGCCGGGAC GTGACCTCCA TGCCCGTCGA CGAGTTGCGA
CGCCTTCGGC AACGCAGCTT CGGGATGGTC TTCCAGAACT TCGCCCTCTT CCCGCACCGT
ACTGTGCTGC AGAATGCCGC CTTCGGCCTA GAGGCCATGG GCGTGCCCCG TGCCGAACGC
GAGCGTCAGG CCATGGTCTC GCTCGAAAGG GTGGGGCTCG CAGAGTGGGC CGCATCGCGT
CCCGCGCAGC TGTCCGGGGG CATGCAACAG CGTGTGGGGC TTGCAAGGGC CCTTTCCCTC
GACCCCGACA TCCTGCTCAT GGACGAGGCG TTCAGCGCGC TCGACCCACT CATCCGGCGT
GACATGCAGG ACGAACTGCT GCGGTTGCAG GACGACCTGC AGAAGACCAT CGTGTTCATC
AGTCATGACC TCGACGAGGC CCTCAAACTG GGTGACCGCA TCGTGCTCAT GCGCGACGGG
GCGGTGGTGC AGATAGGCAC ACCCGAGGAC ATCCTCACCA ATCCTGCCGA CGACTATGTC
GCCCGCTTCG TGGGCGAGGC CGATGTGACC AAGGTGCTCA CGGCTGGCAG CGTCATGAAG
CGCTCCGAAG CCGTGGCGGT GCTCGGCATA GACGGCCCCC GCACCGCCCT GCGCAAGATG
CGGCGTAACG CCATCGCAAC GCTCTTCGTG CTGGACGAAC GGCACAGGCT GGTGGGGCTC
ATCACCGCAG ACGATGCGGC GCGCCTCGCC GCCGAGGGCG TACGCGAGCT TGGTTCCATC
GTCAGACGTG ACATCGCCAC GGTTCCACCA GAAGCCCCGG CTACGGAACT CATATCCCTC
ATGGCAGACC TGCCGCATCC GCTGGCTGTC GTGGACGAAC GTGGCAGGCT GGCTGGCGTC
ATCGTTCGCG GTCTGCTGCT GGGGGCGCTT GCCGAACGCG GAGGTGTCGC ATGA
|
|---|
| Protein sequence | MSKLSIRNLT KIFGPHPEKA LGLLEQGLGK EEIHRRTSHA VGVDRASFDV EEGEIVVVMG
LSGSGKSTLV RCLNRLIEPT AGTVTVDGRD VTSMPVDELR RLRQRSFGMV FQNFALFPHR
TVLQNAAFGL EAMGVPRAER ERQAMVSLER VGLAEWAASR PAQLSGGMQQ RVGLARALSL
DPDILLMDEA FSALDPLIRR DMQDELLRLQ DDLQKTIVFI SHDLDEALKL GDRIVLMRDG
AVVQIGTPED ILTNPADDYV ARFVGEADVT KVLTAGSVMK RSEAVAVLGI DGPRTALRKM
RRNAIATLFV LDERHRLVGL ITADDAARLA AEGVRELGSI VRRDIATVPP EAPATELISL
MADLPHPLAV VDERGRLAGV IVRGLLLGAL AERGGVA
|
|---|
| |