Gene Dvul_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0945 
Symbol 
ID4662830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1161132 
End bp1161881 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID639819168 
Product6-phosphogluconolactonase 
Protein accessionYP_966393 
Protein GI120601993 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.36519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.244402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCA GCCGTTCCAT CCACCTCTCG CTGCACATCC ACAAGAACCC CGCCGCCATG 
GCAGAGCGCG CCGCCCACCT GCTGGCCGAC TGCTGCGAAC AGGCCATCGC GGAACGGGGC
GTGTTCAATC TGGCCCTTTC TGGCGGCTCC ACCCCTATCC CGCTTTTCAG ACTGCTTTCA
AGCTCCGACT GGGCCGAACG GCTGCCGTGG GAGAAGATAG CCGTATACTG GGTGGACGAG
CGCTGCGTCG GCCCCGAGCA TCCCCAGAGC AACTACGGCG TGGCCCGCCG TGAACTGCTC
GGCAACGTAC CCGCCACGCG CTTCTACCGC ATGAAGGGCG AAGCCGACCC CGTGGATGCG
GCCCTCGCCT ACGAGAATCT CCTGCGCGAC CATTTCAACC TCGGCCCCGG CGAATTCCCG
CGCTTCGACT GCGTCATCCT CGGCATGGGC GACGACGGAC ACACCGCCTC GCTCTTTCCG
GGCGAACCCG GCCTTCAGGA ATGTGAACGG CTGGTCATCG ACCAGTACGT CCGCAGACTC
AAGACCGACA GGCTCACCCT CACCCTGCCC GTGCTCAACA ACGCCCGGTG CTGCCTCTTC
CTCGTCACGG GCGAAGAGAA GCACGACGTG CTCTCCAAGG CCCTGAACCT GCTCTCCGAA
CCTTCGCTGC CCGCGCATTT CGTGCGTCCT CCCTCCGGCG ACCTTGTATG GATCGTCGAC
GACGCGGCGG CACGCGGCCC CGAGAAGTAG
 
Protein sequence
MFRSRSIHLS LHIHKNPAAM AERAAHLLAD CCEQAIAERG VFNLALSGGS TPIPLFRLLS 
SSDWAERLPW EKIAVYWVDE RCVGPEHPQS NYGVARRELL GNVPATRFYR MKGEADPVDA
ALAYENLLRD HFNLGPGEFP RFDCVILGMG DDGHTASLFP GEPGLQECER LVIDQYVRRL
KTDRLTLTLP VLNNARCCLF LVTGEEKHDV LSKALNLLSE PSLPAHFVRP PSGDLVWIVD
DAAARGPEK