| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0929 |
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| Symbol | |
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| ID | 4663378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1142619 |
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| End bp | 1143293 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639819152 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_966377 |
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| Protein GI | 120601977 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.367308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACATTC CGGTGATTCG CAACGTGCTG GAGGCCAACG ACAAGATGGC CGACCAGCTC
CGCAAGCTTT TCGCACGCCA CGGCGTGCTG GTGCTCAACC TCATCAGTTC GCCCGGGGCG
GGCAAGACCT CGGTGCTTGA ACGCACTCTC ACCGACCTGC GCGACGAATT CCGCATGGCC
GTCGTCGAGG GCGACCTCCA GACCGACAAC GACGCACGCC GCGTCGCCGC CACGGGCGCC
CGTGCCGTGC AGATCAACAC CGACGGCGGC TGCCACCTCG ACAGCAACAT GGTGCTCGAC
GCCATCAGCA ACTTCGACCT CGCAGACCTC GACATCCTCT TCATCGAGAA CGTCGGCAAC
CTCGTCTGCC CGGTGGAGTT CGACTGCGGC GAAGACCACA AGGTGGCCCT GCTCAGCGTC
ACCGAAGGCG ACGACAAGCC GGAGAAGTAT CCGCTGCTCT TCAACCTTTC GTCCGTCATG
CTGCTCAACA AGGTGGACCT TCTGCCCTAT GTCGACTTCG ACGTGGAACG GGCACGCCGC
TTCTCCACCC GTCTGAACCA GAACCTCACC ATCTACGAGC TTTCATGCCG CAGCGGCGAG
GGGTTGGCCC CGTGGTACGA CTGGCTGCGC GAGGCCCTCA AGGCCAAGCG CGCCGCAGCG
GAGGCCAAGG CATGA
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| Protein sequence | MDIPVIRNVL EANDKMADQL RKLFARHGVL VLNLISSPGA GKTSVLERTL TDLRDEFRMA
VVEGDLQTDN DARRVAATGA RAVQINTDGG CHLDSNMVLD AISNFDLADL DILFIENVGN
LVCPVEFDCG EDHKVALLSV TEGDDKPEKY PLLFNLSSVM LLNKVDLLPY VDFDVERARR
FSTRLNQNLT IYELSCRSGE GLAPWYDWLR EALKAKRAAA EAKA
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