Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0921 |
Symbol | |
ID | 4663422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1133266 |
End bp | 1133946 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639819144 |
Product | HhH-GPD family protein |
Protein accession | YP_966369 |
Protein GI | 120601969 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.595294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.257216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAGCG ACAGGCAACG ACTTCTCCTT GACATGTACG CGGCGATGTC TGCCCGCCTC GGCCCAAGCG GCTGGTGGCC CGGCGAGACT CCCCTTGAGG TGGCCATAGG GGCCGTGCTC ACCCAGAATA CGGCGTGGGG CAATGTGGAG AAGGCCATCG CCAACCTGCG TGATGCCGGT CTTCTCTCGG ATGTGGGCGC GCTTCTCGCC GCTTCGCCCC AGTTGGTCGA GGCCTGCATC AGGCCTTCGG GCTATTTCCG CATGAAGACG ACCCGTCTGC GTGACCTCAT GCTCTTCTTC GACGAGGCCT GCGCGGGCGA CCTCGACGCG CTTTCGGCGT CTGCCGGGGA GGACGGTGAC GCCCTGCGTG AGCGCCTGCT GTCCGTGAAG GGCATCGGCC CGGAGACTGC CGACTCCATC CTGCTCTATG CCTTCGGGCA TCCCTCCTTC GTGGTCGATG CGTACACGCG TCGCATCCTC TCGCGGCACG GCCTTCTGCC CGAGGATGTC CACTACGACG AGATGCGCGA CTTCTTCATG GATGTTCTCG ACCCCGACCC GGTGCTCTAC AACGAATTCC ACGCCCTCAT CGTCCGGGTG GCCAAAGGGT GGTGCCACAA GTCCCGTCCC GACTGCGCGG CGTGCCCTCT CGGTCCCTTC ATGGAAGGGT GCGCGTGCTA G
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Protein sequence | MRSDRQRLLL DMYAAMSARL GPSGWWPGET PLEVAIGAVL TQNTAWGNVE KAIANLRDAG LLSDVGALLA ASPQLVEACI RPSGYFRMKT TRLRDLMLFF DEACAGDLDA LSASAGEDGD ALRERLLSVK GIGPETADSI LLYAFGHPSF VVDAYTRRIL SRHGLLPEDV HYDEMRDFFM DVLDPDPVLY NEFHALIVRV AKGWCHKSRP DCAACPLGPF MEGCAC
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