Gene Dvul_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0918 
Symbol 
ID4663066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1130743 
End bp1131456 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content57% 
IMG OID639819141 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_966366 
Protein GI120601966 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.709473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACCG CATTGCAGTA CACGTTCGAC TGGAATCTCG TTCTCTCGGG TGAGCGTCTC 
GACTGGATAG TGCAGGGGGT CATCACCACC TGCCAGCTTT CAGGCCTTTC ACTCGTGCTC
GCCATGCTGC TGGGTACGCT TATCGCCGTC ATGCGCCTTT CCGGCGTACG GCCTTTCGTG
TGGTTCAGCG TTGCCTTTAC GGAGTTCTTC CGTAACACGC CGCTTCTGGT GCAGATATTC
TTCTGGTACT TCGGTTCCGA CGCCGTATTG CCCGACGCCG TGAACCAGTG GTTGTACAAG
CAGAACTTCG AATTCGCGGC GGGGGTCATC TCGCTCACCG TCTATACCGC CGCGTTCATC
GCCGAAGAGA TACGTTCCGG TATCTTCTCC ATTCCCCGCA CGCAGCTTGA GGCCTCACGC
GCATGCGGCC TGTCGTTCAT GCAGGCCATG TCCTACGTCG TGCTGCCGCA GGCCTTTCGC
ATCATCGTGC CGCCGCTCAT CTCGCAGGCG CTCAACCTGT TCAAGAACTC TTCGCTGTGC
ATGACCATCG GTGTCATGGA ACTCACCTAC ATGGCCCGCC AGATAGAGTC GTACACGTTC
CACGGCTTCG AGGCGTTCAC CGTGAGCACG CTCATCTACC TGTGCATATC GCTCATGGTC
TCGCTTCTCA TCAACCTGTA CAACACGCAC TTCCTGCGGA CGATCAAATA CTAG
 
Protein sequence
MDTALQYTFD WNLVLSGERL DWIVQGVITT CQLSGLSLVL AMLLGTLIAV MRLSGVRPFV 
WFSVAFTEFF RNTPLLVQIF FWYFGSDAVL PDAVNQWLYK QNFEFAAGVI SLTVYTAAFI
AEEIRSGIFS IPRTQLEASR ACGLSFMQAM SYVVLPQAFR IIVPPLISQA LNLFKNSSLC
MTIGVMELTY MARQIESYTF HGFEAFTVST LIYLCISLMV SLLINLYNTH FLRTIKY