Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0902 |
Symbol | |
ID | 4663273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1110123 |
End bp | 1111778 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639819125 |
Product | Fis family transcriptional regulator |
Protein accession | YP_966350 |
Protein GI | 120601950 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0336784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCAAC CCGGAAAATT CACACGCATC GCCCCGCATG TGCTGCGCGA GTTCGACATC TCGCCCTTCT TCGACCTGTT GCTCAGCATG GCGCAAGAGC GCACCGTCGA AGGGCTGCTG CAACTCAGCA CACGCGTCTA CCGAGGCACG CATGTGGCCT GTGGCGGCGT ATGGTTCACC GAGAAGGCCT CCGGCGACGA CGGCGCGGGA TGGGTGATGC GCCTCATGAC CCTTGCAGGG CGCACACACA GGCATCCGCG CACATGGACG CACGCCACTG GCGACTACTC GCTCATCCCC CCGCAGGAAC CGCTTCTTGG GGCCGTGGCG TTGAGCGGCG AACCTCTGGT CGTCGCGTCC CCCGATGAAT GGACGCGCCC GGAATGGGCC GTCGACGAAG GGTTCGCCGC CTATTCGGCC TTTCCCATGA TGTGCAAGGG TGAACTCGTG GGACTGCTCG CCCTCTTCTA CGAGCGCCCC ATGACGGACA GGCTGGGCGA CCTGCTGTCC CTTCACTACA AGATGCACAA GATATATGCC GACTCGCTGG CAGCCGCCAT CACCAATGCA CGCGCCTTCG AGGAGATTCT GCACCTGCGC CGCGAACTCG AACGCGAGAA CGAACGGTTG CGCCGTCAGG TCGAGCATGG AAGCGCAGAC GGCAACCTGC CCATCGTGGG CGACTGCCCC GCATGGCTTC GCGTTCTGGC GCAGGTGGAC ATGGTGGCAC CTACCGACGC CACAGTGCTG GTGCAGGGCG AATCGGGCAC AGGCAAGGAG CTTGTGGCTG AAGCCATCCA CCGACGCAGT CAGCGTTCCA CAGCCCCACT TGTGCGCGTC AACTGTTCCG CCATCCCCCG CGAACTGTTC GAGAGCGAGT TCTTCGGCCA CGTCAAAGGG GCCTTCACCG GGGCTGTGCG CGACCGCATA GGCCGTTTCC AGATGGCCGA CGGTGGCACG CTGTTCCTCG ACGAAGTGGG CGAGATTCCG CTTGAACTCC AGGGCAAACT CCTGCGCGTC CTGCAGGAGG GCACCTTCGA ACGCGTCGGT GAAGACAGGA CCCGCAGCGT CGACGTACGC ATCATCGCCG CCACCAACCG TGACCTCCGG CAGGAGGTGG ACGCCGGAAG GTTCAGGCAG GACCTGTTCT TTCGCCTTAG CGTCTTTCCG GTGGAATTGC CGCCCCTGCG CGACCGCCAG GGAGACATTC CGCTGCTGGC GCGCCACTTC ATCGCCCAGT CCAGCCGCCG TCTCGGCCTG CCCACCCCCC GCCTCACCCC GGCAGCGCTG GCACGCCTTT CAGCCTATCC GTGGCCCGGA AACGTGCGCG AGATGCAGAA CGTCATCGAA CGCGCCGTCA TCATGGCAGA AGAGGGAGCG CTCGGCATGG ATGCACTCCC CGCCCCCGAA GGGCTGCGGC ACGACGACAG GGTGTCTGTC GCCGCCCCGG CACCCGGCGC GACGACCATC GTCACCGAAG AGGAGTGGCG CACCATGCAG CGCGACAATA TCAGGCGCGC CCTGCAAGCC GCCGAAGGAC GCGTGCATGG CGTGGGGGGG GCCGCTGAAC TGCTTGGCAT ACCGCCGACC ACGCTGCGTT CGCGAATGCA GGCGCTGGGG CTGTCTCCGA AACAGGGGCA CGGCCCGAAA GGCTAG
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Protein sequence | MLQPGKFTRI APHVLREFDI SPFFDLLLSM AQERTVEGLL QLSTRVYRGT HVACGGVWFT EKASGDDGAG WVMRLMTLAG RTHRHPRTWT HATGDYSLIP PQEPLLGAVA LSGEPLVVAS PDEWTRPEWA VDEGFAAYSA FPMMCKGELV GLLALFYERP MTDRLGDLLS LHYKMHKIYA DSLAAAITNA RAFEEILHLR RELERENERL RRQVEHGSAD GNLPIVGDCP AWLRVLAQVD MVAPTDATVL VQGESGTGKE LVAEAIHRRS QRSTAPLVRV NCSAIPRELF ESEFFGHVKG AFTGAVRDRI GRFQMADGGT LFLDEVGEIP LELQGKLLRV LQEGTFERVG EDRTRSVDVR IIAATNRDLR QEVDAGRFRQ DLFFRLSVFP VELPPLRDRQ GDIPLLARHF IAQSSRRLGL PTPRLTPAAL ARLSAYPWPG NVREMQNVIE RAVIMAEEGA LGMDALPAPE GLRHDDRVSV AAPAPGATTI VTEEEWRTMQ RDNIRRALQA AEGRVHGVGG AAELLGIPPT TLRSRMQALG LSPKQGHGPK G
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