Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0890 |
Symbol | |
ID | 4663855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1096498 |
End bp | 1097199 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639819113 |
Product | ABC transporter related |
Protein accession | YP_966338 |
Protein GI | 120601938 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.999916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGA CACCATCCAC ACCGCTGTAC CGCCTCGAAG GCGTAGGCAA GGAATACGAC GGCCCCGGCG AGGAACTCGT CATCCTGAAG GGCCTCGACC TGACCATAGA GGCGGGCGAG TCCGTCGCCA TCGTCGGCGC CTCCGGTTCC GGCAAGTCCA CCCTCTTGCA TCTGCTCGGT GCTCTTGATA CTCCCACATG GGGAAAACTG CATTTTCTCG ATCGTGACAT GGGGGCCATG TCGCCGGAAG AGAAGGCCGC ATTCCGCAAC CGCGAGATCG GCTTCGTCTT TCAGTTCCAC CACCTTCTGC CCGAGTTCAG CACGGTGGAG AACGTGGCGA TGCAGGCCAT CATCAGCGGC ATGCCGCATG CGGAGGCCTA CGGCCTTGCG CGCGAGGCCC TCGACAAGGT GGGACTTTCG GGCCGGGTCG AGCACAAGGT GACGACCCTT TCAGGCGGTG AGCGGCAACG TGCGGCCATT GCACGCGCCA TATTGCTGCG TCCCCGTGTC CTGCTCGCGG ACGAACCCAC CGGCAACCTC GACGAACGTA CCGGCGATGT CGTCGGTAGA ATGCTACTTG ATCTCAACCG TGAACTCGGC ATGACGCTGA TCGTTGTCAC CCATAACCGG GAACTGGCCG ATCTGATGGG CAGGCGCCTC GAACTCAGAG CCGGAGAGCT TTATGACCAA CACCGCCCGT AG
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Protein sequence | MMTTPSTPLY RLEGVGKEYD GPGEELVILK GLDLTIEAGE SVAIVGASGS GKSTLLHLLG ALDTPTWGKL HFLDRDMGAM SPEEKAAFRN REIGFVFQFH HLLPEFSTVE NVAMQAIISG MPHAEAYGLA REALDKVGLS GRVEHKVTTL SGGERQRAAI ARAILLRPRV LLADEPTGNL DERTGDVVGR MLLDLNRELG MTLIVVTHNR ELADLMGRRL ELRAGELYDQ HRP
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