Gene Dvul_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0890 
Symbol 
ID4663855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1096498 
End bp1097199 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID639819113 
ProductABC transporter related 
Protein accessionYP_966338 
Protein GI120601938 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.999916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA CACCATCCAC ACCGCTGTAC CGCCTCGAAG GCGTAGGCAA GGAATACGAC 
GGCCCCGGCG AGGAACTCGT CATCCTGAAG GGCCTCGACC TGACCATAGA GGCGGGCGAG
TCCGTCGCCA TCGTCGGCGC CTCCGGTTCC GGCAAGTCCA CCCTCTTGCA TCTGCTCGGT
GCTCTTGATA CTCCCACATG GGGAAAACTG CATTTTCTCG ATCGTGACAT GGGGGCCATG
TCGCCGGAAG AGAAGGCCGC ATTCCGCAAC CGCGAGATCG GCTTCGTCTT TCAGTTCCAC
CACCTTCTGC CCGAGTTCAG CACGGTGGAG AACGTGGCGA TGCAGGCCAT CATCAGCGGC
ATGCCGCATG CGGAGGCCTA CGGCCTTGCG CGCGAGGCCC TCGACAAGGT GGGACTTTCG
GGCCGGGTCG AGCACAAGGT GACGACCCTT TCAGGCGGTG AGCGGCAACG TGCGGCCATT
GCACGCGCCA TATTGCTGCG TCCCCGTGTC CTGCTCGCGG ACGAACCCAC CGGCAACCTC
GACGAACGTA CCGGCGATGT CGTCGGTAGA ATGCTACTTG ATCTCAACCG TGAACTCGGC
ATGACGCTGA TCGTTGTCAC CCATAACCGG GAACTGGCCG ATCTGATGGG CAGGCGCCTC
GAACTCAGAG CCGGAGAGCT TTATGACCAA CACCGCCCGT AG
 
Protein sequence
MMTTPSTPLY RLEGVGKEYD GPGEELVILK GLDLTIEAGE SVAIVGASGS GKSTLLHLLG 
ALDTPTWGKL HFLDRDMGAM SPEEKAAFRN REIGFVFQFH HLLPEFSTVE NVAMQAIISG
MPHAEAYGLA REALDKVGLS GRVEHKVTTL SGGERQRAAI ARAILLRPRV LLADEPTGNL
DERTGDVVGR MLLDLNRELG MTLIVVTHNR ELADLMGRRL ELRAGELYDQ HRP