| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0861 |
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| Symbol | |
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| ID | 4663488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1062386 |
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| End bp | 1068262 |
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| Gene Length | 5877 bp |
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| Protein Length | 1958 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639819083 |
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| Product | putative DNA helicase |
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| Protein accession | YP_966309 |
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| Protein GI | 120601909 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACAGC TAGATTTCGT GTCTGATGAC AGCGGGTGCG AGGACTTGGA AAAGACAATC
CTCATTGACG TCAGCACCCT TCCCAAGCTC AATCTGGCCC TTCAGCAGAA TGCGATCCCC
TTGATCCAGG ACCTGGGAAT CAAGAACAAT ACTCAGGAAC CGCTTGAACG TGTCGAACTC
GTTCTTCAGT CCGATCCGCC TCTATGCCAG CAGCAAATTT GGAAGATGGA ACGCATCGGG
GCGGAAGTTC ATTTCCGACT GCCTGAGCGT GCTCTCAACG TCTCAGCGAT ATTTCTCTCC
GAACTCCAGG AAGCCGTTCG CGCTGTTCTC TCCTTCCGCC TGATGGTGTC CGACCAGGAA
GTCTGCCGCA AAGACGTTCC CTTAGAAGTA CTCTCGAAGG ACGAGTGGGG CGGGGTCGGG
CACATCCCTG AAATTGCGGC AGCGTTCGTC CGGCCAAACG ACGTGGCCGT GGAACGAATC
ATCAAACAGG CTGCCGAAGT GCTCAGGAAA CGCTCGAAGC CTTCCGCGTT CGACGGCTAC
AAGACCGGCG ACCGCAAGCG AGTCTGGGAG GTTCTGTCGT CTCTGTGGGC GTCCGTCTGT
TCCCTCGGGC TGGACTACAT CCTCCCTCCA GCCAGTTTCG AACAGCAGGG GCAGAAAGTC
CGTTCACCCT CGCGTGTACT GGAAGCAGGT CTCGGCACCT GTCTTGACCT TTGTCTGCTG
TTTGCTTCCT GCATTGAACA GTGCGGTCTG AATCCGCTGC TGGTGTTCGT GGACGGGCAC
GCCTTCCCAG GGGCTTGGCT GTCGGACGAA GACTTCTCCA CCGTCGTGGT GGATGACCCA
CTTTTCCTGC GCAAACGTAT TGAACTCGGA GAGATGGTCC TTTTCGAAAG CACCCTAGCC
ACTGACCGCC CGGCCCCGGC TTTCTCCTTC GCCTGCCAGA CAGGAGCTGC CCACCTGGAC
GGTCTCAAGG CGTTCATCCT GGCCGTGGAT GTCAAACGCG CCCGGATTCA GCGCATCAAA
CCACTGGATG AGGCCCGTCC CGCTCCCACC GCCGACTCAG GACCGGCGCA AGTTCAGGAG
CCTGTCTGGG AAGAAGCTCC CGACCTCCCC GAGAGCATTG CCCTGCCTTC TCCCGATGCC
CAGGCCGATG TTCCAGGGGG ACGCCTGGAT AAATGGAAGC GCCAGTTGCT GGACCTCTCC
CTGCGCAACA AACTTCTCAA CTTCCGACCC GGGAAAACCG CGATCTTCCT CAACTGTCCG
GACCCGGCAA AGCTGGAAGA CATGCTGGCC GAGGGCGAGA AGTTCAAGAT TCTGCCCGAT
CCGCGCGTCA TGCTGGAGAA CGATCCTCGC AGTCAGGAAC TCCATCGACA ACAGAACCAG
GAGGAAGCCC GCTTCATCCA TGCCCGACAA GCCTTGGGGA GGAAAGAACT CCTGGCCGAC
GGCCCAGGGG ATCAACTTGA TGGCAGGCTG GTGGAACTTT TCAGGGCAGT GCGCTCCCAG
TTGGAGGAGG GAGGGGCTAA CACACTCTAC CTGGCCATAG GCATCCTGAA CTGGAAAAAG
GACCAGACTT CGGACCGCAT CCACAAGGCT CCCTTGCTCC TCATTCCGGT AATGCTGCAC
CGCCGATCGG TCCAATCTGG ATTCACCTTG TCCATGCACG AGGACACTCC ACGCTTCAAT
CCCACGCTAT TGCAAATGCT CAGGCAGGAC CACGCTCTGT CCATGTCCGA ATTTGAAGGC
GACCTGCCCA CAGACGAATC GGGGCTGGAC ATTCCGCTCA TCCTCAGGAC CGTACGCCAG
TACGTGCGGG ACATTCCGGG ATGGTCCGTC AGCGATAGCG TGGTGCTCTC CACCTTCTCG
TTCAGCAAGT ACCTCATGTG GAAAGACCTT GCCGACCGTA CGGATCAACT CAAGGAAAAC
CCCATTGTCC GCCACCTCAT CGACACCCCT CGGGAGCCCT ACGGCGCTGG AGATGACTTT
CCTCAGGCGG ATGCCCTTGA CGACACGCTG CCTGCCCAGG AGTGCTTCAC CCCCCTCATG
TCGGACTCCT CCCAGTTGGC GGCAGTCGCC GCCGCCTCCC GAGGGAAGGA TTTCGTTCTT
GTCGGCCCAC CAGGGACAGG AAAAAGCCAG ACCATCACCA ACATCATCGC CCAGTGTCTG
GCGATGGGCC AATCCGTGCT CTTCGTATCG GAAAAGAAGG CTGCTCTGGA TGTCGTGTAC
CGCCGATTGC GAGATGTGGG CCTGTCCGAC TTCTGTCTCG AACTCCATTC CAACAAGGCC
AACAAAGTGG AGGCCCTCAA CCAACTGCGC GCCGCCTGCG ACGCAAGCGA AGAGTTTGAT
CCCCGCGAAT GGGAAAGAGA ATCCCATCGG CTGCAATCCG TCCGGAGCCA GCTGAACGCC
TTCGTTCGCC GCTTGCACCA CCGTCATCCT AACGGAATCT CGGCTTATCA GGCCATGGGC
CGCTGTGTTG CAGGTGCACA GGTTCCGCTG GTGAACCTCT CCTGGCCAGG TGCACACCAG
CACGATGTGG ACGCCATGGA CGGCCTGCGC GACGTCGCTC GCCGAATCGG GATCACGCTC
CATGCGGTAG GGGAAATATC CGGTCACCCG CTGACCGGTC TTTCAAAGGG GGAGTGGTCG
CCCAGTTGGC AAACTGAACT CTTGGAGGCG GCATCGACGC TCCCGGGCAA AGCGACTGCC
CTCCTTCAGG CCAGCGAAGC TTGCCGAAAG GCCATGGGAT TACCTGCAAC GCCGTCAGGA
AGAAGATGGT TCACCGGATT GACTCGCCTC GCTGGGCTCA CCCTGGAAGC TTATTGCAAG
CCCTATGCCT TCATCCTCTC TCCTGGAGCA TCCCGGGTGA CGGAGGATTT GCGCAAGGGC
CTGACCCTGC AGGCCGATTT CAGGGAGACC TGGAGCAAGC TCTCCGTGGC CTACCGGATG
GAAGCCACCG ACCTGGACCT GGACGGCTTG AGCGTTGCAT GGGAGGCTGG AAGCTCGGCT
TGGTGGCTCA AGCGCTTTTT CGCTTGCAGA GGGGTGCGAA ACTCGCTCAA ATCCCGAACA
GAAGGGAAGG AGAACCCCCA GGATATTCCC AGCGACATCA ATATGTTACG CCGTGCACGA
GGATGTCTTG TCGAACTATC CTCACTCGAT CATTTGCAAG AGTCCACCAG TGGCCTGTGG
CGCGGGCTGG ACACGGTCAC TGAAGAGATC GAAACGGCTC TAATTTGGGC GGATGCGCTA
AGAGCCACCA TGTACATGCT GGCCAACACT CCCGAAGAAC TGGCCGCACT CAGGCTGGCT
GTCACCCGGA TACTGGAACT GGGGGAGGAT CTACTCTCCC CAGAAGGCAT CTTGAGGCCA
CGGGCAGAAC ACCTCAAAGA AGCCTTCCGT CAGTTCGAGG AGTCTCTGGA GAAGATCACT
TTCCTGACCG GGACATCTCA GGAGGAGTTG TTCCCCGAAA ACGACGAAGG ATGGTTGGAG
ACCATCGGCG AACGTTGCAG GGCTTGGCAG GCGTTGGCTC CCAAGATCAA GAACTGGTGC
GCCTGGCGCG GTGTGCGACA GGAGGCCATG ACTGTGGGTT TGAGTCCGCT CATCACTACT
CTAGAAAACC TGAGCGGGAT TGAGGTTGAT GTCCCGGAAA TGTTCGAGGT CAACTACTGT
CGTTGGTGGA TTCAGGCCCT GGTGGACAGC GACGAGGTCC TTCGAGGCTT CGTTTCCCAT
GTGCATGAAG GGCGCATCGA CGAGTTCAGG AAGCTCGACG AGACCATCAT GGGCCTGACG
AGGTCCTGTG TCAGGGCCAG ATTGTGCGGT CGCATGGCCG CACTGGATGA CAAGAGCCGT
AAAAGTGAAA CGGGGGTGTT GAACCGGGAG TTGCAAAAGA AGAAACGACA TATGCCACTT
CGTCAGCTCA TCACAGCCTT GCCCAATATC CTGACGCGGG TCACGCCCTG CTTTCTCATG
AGCCCCCTGT CCATCGCCCA GTTCCTGGGC ACGCAGCAAG CATTCTTTGA CGTGGTGGTG
TTCGACGAAG CCTCCCAGAT TCCCGTGTGG GACGCCATCG GAGCAATCGC GCGCGGCAGA
CGGCTGGTCG TGGCAGGTGA TCCGAAGCAG TTGCCGCCTA CCTCCTTCTT TGACAGGCGC
GATCAGGTTG ACCTGGATGG GGACGATGTG GACGAGGACA TGGAAAGCAT CCTGGACGAA
TGCATAGGCG CGAGCCTCCC AACGCTCCAA CTCTGCTGGC ACTACCGAAG CAAGAGCGAA
AGCCTGATCA CCTTCTCCAA CCATCGTTAT TACGGTGGCG GACTCGTCAC CTTCCCCACG
CCAGCCACGA CAGACCGAGC CGTCCGCTTT CACCATGTGC CTGGAGGCGT TTACGAGAAA
GGCGGGGCCA GAGTGAACAA GGCCGAAGCG CAAGCCATCG TCGAGAACAT CGTCAAACGA
CTGAGCGATC CAGCCTTCAA CCATGAAGGC ACAAGCCTAG GAGTGGTTAC TTTCAACCAG
GAACAGCAAC GGCTCATTGA GGACCTTCTG GAAGTGGAAC GAAGGAAGGA CCCTGCCGTG
GACGCGCATT TCTCGGAAGA AAGGCTGGAA CCGGTGTTCG TGAAGAACCT GGAAAACGTC
CAGGGGGATG AGCGTGACGT GATCCTCTTC TCGGTGACCT ACGGCCCAGA CGCATCCGGG
CGGGTCTCGA TGAACTTCGG TCCGCTGAAC AAGTCCGGTG GAGGCAGAAG GCTCAACGTG
GCCGTGACCC GAGCCCGACA GGAGATGGCC GTTTTCTCCA CACTCAGACC CGACCAGATA
GACCTCGCAA GGACAAATGC CGAGGGCGTG AAGGACTTCA AGCATTTCCT AGAGTACGCC
GAACGCGGCC CCAAGGCACT GGGAGAGGTG ATCCACGGCT CCCTCGGCGG TTACGACTCC
CCCTTCGAGA AAAGCGTTGC CGAACGGCTC CAAGCTAGGG GCTGGTCCGT CCACACACAG
ATTGGCGTAT CCGCATTCCG TATAGACCTT GGTGTGGTGC ACCCGGACAA GCCGGGACGG
TATCTGGCTG GAATAGAGTG CGACGGCGCG ACGTACCACC GGTCGGCCAC GGCCAGGGAC
CGGGACCGAT TGCGGCAACT GGTGCTGAAC CGGCTCGGGT GGAACATCTT CCGGGTCTGG
TCCACTGACT GGTGGACCGA CAGCGCGGAT TCCTTGGACA GGCTGCATGG CCATTTGAAA
GGGCTACTAG AACAGACCCG GCAATCGGTC GACGAGGATG CCACGAAGCC CCCAAAGGCA
CAGGAGTCTA CGCCGCCTGC AGCCGAAGCC ACGATTGCGT CCCCCGGCCT AGTATGCGGC
ATGGTAACTC AAGACTTCCC TCGCCAGGAT CAGGAAGATA TGCCGCAAAG CGATGACTCC
ATCATGAACG GCGCACGTGA GCGTTTCCAC GACCTGGACT ACACGTCAGA ACTCAAAGAG
ATGGTGGGCG CGCTGATCGC GAATGAAGGC CCTATCAGGG AAGACCTGCT GGTCCGCAAG
ATCGCCAGGG CTCATGGCCT GAAACACAGC GGCGAACGGA TCAAGAATCG CGTGCTCGCG
CTTGTCAGTA GAACCTGTCC TAAATCACGT GAAGAGGGCA TGGTGTTCTA CTGGCCGGAA
GGATGCGCTC CCTCAAGCTG CACCACATGC CGACTCCCCA GCCCCGGTGA GGAAGCCCGA
AGCGTTGATT CAATTGCCAT ACAGGAACTG GTTGTCCTGG CCCGACAGGT TATTTCAGAA
GGTGTTCAGC CGGAGGAAGC GCATATCCTA ATGGGCACCC GGTTGGGGCT AAAAAGGTTG
CGGCAACCAT CTGTCAAGCG CATGCAAAGT GCAATTAAGC GTGCCATAGA CGCTTAA
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| Protein sequence | MEQLDFVSDD SGCEDLEKTI LIDVSTLPKL NLALQQNAIP LIQDLGIKNN TQEPLERVEL
VLQSDPPLCQ QQIWKMERIG AEVHFRLPER ALNVSAIFLS ELQEAVRAVL SFRLMVSDQE
VCRKDVPLEV LSKDEWGGVG HIPEIAAAFV RPNDVAVERI IKQAAEVLRK RSKPSAFDGY
KTGDRKRVWE VLSSLWASVC SLGLDYILPP ASFEQQGQKV RSPSRVLEAG LGTCLDLCLL
FASCIEQCGL NPLLVFVDGH AFPGAWLSDE DFSTVVVDDP LFLRKRIELG EMVLFESTLA
TDRPAPAFSF ACQTGAAHLD GLKAFILAVD VKRARIQRIK PLDEARPAPT ADSGPAQVQE
PVWEEAPDLP ESIALPSPDA QADVPGGRLD KWKRQLLDLS LRNKLLNFRP GKTAIFLNCP
DPAKLEDMLA EGEKFKILPD PRVMLENDPR SQELHRQQNQ EEARFIHARQ ALGRKELLAD
GPGDQLDGRL VELFRAVRSQ LEEGGANTLY LAIGILNWKK DQTSDRIHKA PLLLIPVMLH
RRSVQSGFTL SMHEDTPRFN PTLLQMLRQD HALSMSEFEG DLPTDESGLD IPLILRTVRQ
YVRDIPGWSV SDSVVLSTFS FSKYLMWKDL ADRTDQLKEN PIVRHLIDTP REPYGAGDDF
PQADALDDTL PAQECFTPLM SDSSQLAAVA AASRGKDFVL VGPPGTGKSQ TITNIIAQCL
AMGQSVLFVS EKKAALDVVY RRLRDVGLSD FCLELHSNKA NKVEALNQLR AACDASEEFD
PREWERESHR LQSVRSQLNA FVRRLHHRHP NGISAYQAMG RCVAGAQVPL VNLSWPGAHQ
HDVDAMDGLR DVARRIGITL HAVGEISGHP LTGLSKGEWS PSWQTELLEA ASTLPGKATA
LLQASEACRK AMGLPATPSG RRWFTGLTRL AGLTLEAYCK PYAFILSPGA SRVTEDLRKG
LTLQADFRET WSKLSVAYRM EATDLDLDGL SVAWEAGSSA WWLKRFFACR GVRNSLKSRT
EGKENPQDIP SDINMLRRAR GCLVELSSLD HLQESTSGLW RGLDTVTEEI ETALIWADAL
RATMYMLANT PEELAALRLA VTRILELGED LLSPEGILRP RAEHLKEAFR QFEESLEKIT
FLTGTSQEEL FPENDEGWLE TIGERCRAWQ ALAPKIKNWC AWRGVRQEAM TVGLSPLITT
LENLSGIEVD VPEMFEVNYC RWWIQALVDS DEVLRGFVSH VHEGRIDEFR KLDETIMGLT
RSCVRARLCG RMAALDDKSR KSETGVLNRE LQKKKRHMPL RQLITALPNI LTRVTPCFLM
SPLSIAQFLG TQQAFFDVVV FDEASQIPVW DAIGAIARGR RLVVAGDPKQ LPPTSFFDRR
DQVDLDGDDV DEDMESILDE CIGASLPTLQ LCWHYRSKSE SLITFSNHRY YGGGLVTFPT
PATTDRAVRF HHVPGGVYEK GGARVNKAEA QAIVENIVKR LSDPAFNHEG TSLGVVTFNQ
EQQRLIEDLL EVERRKDPAV DAHFSEERLE PVFVKNLENV QGDERDVILF SVTYGPDASG
RVSMNFGPLN KSGGGRRLNV AVTRARQEMA VFSTLRPDQI DLARTNAEGV KDFKHFLEYA
ERGPKALGEV IHGSLGGYDS PFEKSVAERL QARGWSVHTQ IGVSAFRIDL GVVHPDKPGR
YLAGIECDGA TYHRSATARD RDRLRQLVLN RLGWNIFRVW STDWWTDSAD SLDRLHGHLK
GLLEQTRQSV DEDATKPPKA QESTPPAAEA TIASPGLVCG MVTQDFPRQD QEDMPQSDDS
IMNGARERFH DLDYTSELKE MVGALIANEG PIREDLLVRK IARAHGLKHS GERIKNRVLA
LVSRTCPKSR EEGMVFYWPE GCAPSSCTTC RLPSPGEEAR SVDSIAIQEL VVLARQVISE
GVQPEEAHIL MGTRLGLKRL RQPSVKRMQS AIKRAIDA
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