Gene Dvul_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0845 
Symbol 
ID4663985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1036562 
End bp1038478 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content68% 
IMG OID639819067 
Productextracellular solute-binding protein 
Protein accessionYP_966293 
Protein GI120601893 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4166] ABC-type oligopeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0910462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCC TGCCGCGCCT GCACCCTCGC GCCTACGTCT TCAGCGGCCT CACCGCCCTC 
ATGCTCTGTC TCGCCGCCAT CGCCCCCGCC ATGGCGGGTG TCCGCACACA CGCCCTCACC
CTTGCCGGGG CCGTACCCGC ACTCTCAACG GGCTTCGCGC ACATGCCGCA TGTGAACCCC
GAGGCACCCA AAGGGGGCAC ATTGCGTCTT GGCGTCATCG GCGGCTTCGA CAGCCTGCAC
CCCTTCATCA TGCGTGGCAT CCCCGCCGCA CAACTGGGAC TGACCTACGA GACGCTGGGC
GAGACCGTAC CCGGCGAAGA TGGCGTCATC TACGGTCTGC TGGCCGAGAG TTTCGAAGAG
TCCGCAGACG GCGGGCATCT GGTTTGCCAT CTCGCACCCG CGGCACGCTT CGCCGACGGG
CACCCCGTCA CCGCCGCCGA CGTGGTCTTC TCGTTCGATA TGCTCACCCG CCACGGGTCG
CCCTTCTATC GCGACTACTA CGCCGGGGTC AGCACCGTGA CCGCGGTGGA TGCCCGCACC
GTGCGCTTCG ACTTCACATC GCGTCACAAC GCCGAACTTC CCTACATCGT GGCCCAGTTG
CCTGTGCTGC CCCGTCACTG GTGGCAAGGG CGCGACTTCA CCGCACCGCA AGCCGAAGCC
GCACCGGGCA GCGGCCCGTA CCGCGTACGC GAGGCACGCC CCGGTTCAGG CATCACCTAC
GAACGCGTTC CGGGATGGTG GGGGGCGAAG CTTCCCATCA ACAGGGGCCG CTACAATTTC
GACGTCATCC GCTGCGACTA CTACCGCGAC ACCACCGTGG CACGGCAGGC GTTCCTCGCC
GGAGAGTTCG ACCTGTGGAA CGAGAACACC ATCAAGGACT GGTTCGCCTC GTACGACGTG
CCCTCCGTCC GCGAAGGGCG CATCACCCGC GAGGAGATTC CCCACGGCAG GCCCGAGGGC
ATGGGCGGCT TCGTCTTCAA CACGCGCCGT GCCATCTTCG CTGACGTACG CGTCCGCCGT
GCCCTTGCCA TGTGCTTCGA CTTCGAATGG ACGAACCGCG CCCTCTTCCA CGACGCCTAC
AGACGTTACG ACAGCTTCTT CTCCAATTCT CCGTTCGCAG CCACCGGCAT CGCCACCGAA
GGCGAACGCG CCCTGCTGCG CGAAGTGGCC CCCGAAAGGG CCGCCATGCT CTCCGGCCCC
CCCCCTCTGC CCGCCACGCA CGACGGCAGC GGCGACATCC GCCCCGTCCT GCGCGACGCC
CTGCGCCTGA TGCACGACGC AGGCTGGAAC CTGCGCGACG GACGCCTTGT CGATGGCACG
GGCAGGCCCT TCAGGTTCAC GCTGCTGCTC TCGTCCAAAG GTCTGGAACG CGTGGTGCTG
CCCTTCAGAC GCAACCTCTC GCGCCTCGGC GTGGAGATGG ATGTGCAGGT GGTCGACCAG
ACGCAGTACG TCTCACGGGT GCGTGCCTTC GACTACGACA TGGTGCATGC CACCATGCGC
CAGTCGTCGA ATCCCGGTAA CGAACAGCGC GCCTTCTGGA CGACGGCGGC AGCGGACGCG
CCGGGGTCGC GCAACTACGC GGGCGTGCGC GACACCGCCA TCGACGCACT GGTCGAACGC
ATCATCGCCG CACGCGACGC CGCCACCCTG CGCGACGCCG TCCACGCCCT CGACCGGGTG
CTGCTGCACG GGTACTACGT CGTCCCCGGC TGGTACAGCG ACAGGCAACG CATGGCCTAC
TGGAAGACCC GCGTGGCGCA CCCCGCCTTC ACCCCGCGTG GGGGCATCGA CCTGCACTCG
TGGTGGGCCG TATCCGGCGA TGACACGCAG GCCAAGGGTG TTCAGGCCAA GCCAGCACAG
GGCGACGGTA CTCAGGCTGA TGCGGCCCGC AGCACACCCG CAACGGAGAC ACGCTGA
 
Protein sequence
MSALPRLHPR AYVFSGLTAL MLCLAAIAPA MAGVRTHALT LAGAVPALST GFAHMPHVNP 
EAPKGGTLRL GVIGGFDSLH PFIMRGIPAA QLGLTYETLG ETVPGEDGVI YGLLAESFEE
SADGGHLVCH LAPAARFADG HPVTAADVVF SFDMLTRHGS PFYRDYYAGV STVTAVDART
VRFDFTSRHN AELPYIVAQL PVLPRHWWQG RDFTAPQAEA APGSGPYRVR EARPGSGITY
ERVPGWWGAK LPINRGRYNF DVIRCDYYRD TTVARQAFLA GEFDLWNENT IKDWFASYDV
PSVREGRITR EEIPHGRPEG MGGFVFNTRR AIFADVRVRR ALAMCFDFEW TNRALFHDAY
RRYDSFFSNS PFAATGIATE GERALLREVA PERAAMLSGP PPLPATHDGS GDIRPVLRDA
LRLMHDAGWN LRDGRLVDGT GRPFRFTLLL SSKGLERVVL PFRRNLSRLG VEMDVQVVDQ
TQYVSRVRAF DYDMVHATMR QSSNPGNEQR AFWTTAAADA PGSRNYAGVR DTAIDALVER
IIAARDAATL RDAVHALDRV LLHGYYVVPG WYSDRQRMAY WKTRVAHPAF TPRGGIDLHS
WWAVSGDDTQ AKGVQAKPAQ GDGTQADAAR STPATETR