Gene Dvul_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0820 
Symbol 
ID4664351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1005247 
End bp1008252 
Gene Length3006 bp 
Protein Length1001 aa 
Translation table11 
GC content65% 
IMG OID639819041 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_966268 
Protein GI120601868 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGATG AAGCCGCAGG TTCCGCAGAG GTACAGGCCC TGCGCGAACG CATCGCACGC 
CTTGAGGATG AGAACCGGTT GCTGCGCCTG TGCGCGCGTT TCGAGGGCCC TGCACCCGGT
GAGGCCCTTG GCAGCCTGCT ACCCGAAATC ATCGCACCCG CTTCCGACGC CCCTCTCGTC
TACGCCTATG TGAGCGATAT GCAGACGCAT GAACTGCTCT TCGTCAACCG CTCGCTGACG
ATGGCCGTGG GCGCATGGCA GGGCAGAAAA TGCTATGAAC TGCTGCAGGG GCGGGACACG
CCATGTCCGT TCTGCACGTC GGGCAGACTG CAACGCAATC CCGAACGCCC GGTCGTATGG
GAGTGGCGCA ACCCGCGGCT TGGACGGTGG TTCCGCTGCA TTGACCGCTG CATCCACTGG
CCCGACGGCA GGCCCGTGCG CTACGAACTC GCCGTCGACA TCACGGACAT GCGTGAGGCA
CAGGAGGACC TTCTGCGCTT TCGTGCCGCA CTGGACGCCT CGGCCGAGGC CATTTTTCTC
GTCGACCTCG AAGAAGGCCG TTTCCTTGAT GTGAACAGTG GTGCCTGCAC CATGCTGGGC
TACGACCGTG ACACACTGCT CGGCCTTGGC CTGTGCGGCA TACGTCGCAG CATGGCAGCG
GACGGCTGCC GCCAGATTCT GGACAGCATC GCCGCCGGGG CCGTTCTCGA GAACGTCGAG
ACGGTCTACC TGCACCGGGA TGGGACCTTC GTGCCCGTGG AAGTGGGTGC GCGCCTTGTC
GACCGCGCGG GCGGGCCGCG CCTCGCCATC ATGGTGGCAC GTGACGTGTC GGAGAAGCGC
AAGGCTCGCA GGGCCATGGA GGTGCGTTAC CTCTATGAGC ACGTGCTGTC GTCCTGTGCA
CGCGAGTTGC TCTCCCGGTC ATGTTCCGAG TCGACCCTCG TGGGGGTGCT GGGCGCATTG
CGTCAGGGGG CGGGGGCTTG CAGGGCCTAT ATCTTCGAGA ACTATGAGGA TGCCGAAGGC
CGGCTGTGCT GCTCGCAGCG CTATGAGAGT AGCGCGCCGG GTGTGCGCCC CGAACTGGAC
AACCCGGCGC TGCAGAACAT CATCTATGCG TCGGAGGCTC CCAACTGGCT GCATGAACTC
CGCAAGGGGC GCGCCGTGGT GGGCCCTGTC GCAGACCAGC CGCTGCCGGA GCGTGACGTG
CTTCAGGCGC AGGGCATACG TTCGCTGCTT GTCCTCCCCA TCTTTGCCCG TGGGGTATGG
TGCGGCTTCG TCGGCTTCGA CGACACCCGC ACGGAGAGGA CATGGCAGGG GGGCGACATC
CTCTTTCTCC AGACCGCCAG CGAGATTCTC GGCGCCGCGC TCGAACGCCA CAGGGCAGAG
GCCGAACTCG CCGCGTCGCA CCAGCGGGCC GAAGAGGCGA GTCGGGCCAA GAGCGTGTTT
CTCGCCAACA TGAGCCATGA GATACGCACG CCGCTCAATG CCATCATCGG TCTCACCGAA
CTGACCCTTC AGGAACCCAT ATCCCAAGGC GTGGGCGAGA ACCTGCGGGG CGTGCTGCAT
AGTGCCGAGG CGCTGCTGGC TGTGGTCAAC GACCTGCTCG ACCTGTCGCG GGTCGAGTCC
GGGAGGTTGC ACCTCGAGAG CGTGGAGTTC TCTCCCTCGC GGCTTGCGCG GGGGGTTGTG
CGGCTCATGA CCCATGTCGC CGACCGCAAG GGGCTCGACT TCGAACTCTA CATCGCCCGC
GATGTGCCCC CCACGGTGAC CGGCGACCCG GCAAGGCTTC GTCAGGTGCT GCTCAACCTT
GTGGGCAACG CGCTGAAGTT CACCGACGAA GGGGGCGTGA GCCTCACGGT CACCCCTTGC
ATCTGTTCCA CCGACACAGG GGGGGGTATC CTCAAGGGGG GCAATGGCGG TGTGCGCGGA
TTGCGGTTCA CGGTGACGGA CACGGGCATC GGCATTCCGC CGGACAGGCA GGCGTGCATC
TTCGAATCGT TCGTGCAGGC CGATGAAAGC ACGGCGCGTC GCTTCGGAGG AACAGGGCTG
GGGCTCGCCA TCTCTCGCAG GCTGGTGGAG ATGATGGGCG GCAGGCTTGA ACTGCGAAGC
GAACCGGGCA AGGGCAGCGA ATTCTGGTGT GATGTGCCTT TCGCCTCAGA GGGTGCTGCG
CGGGATGGCA TCTGCGAGGT CGCTTGCGTT GCCACTCATG ATGCCCCTTC TGGTACCGGA
AGACGCCCGG AAGGGCGCGG GGCGGGTGAC AGACGGCTAG AGGCGGCACC CTTGCGGATT
CTCGTCGTCG AGTCGGACCC CCTGTGCCGC AGGGCCATGG TCAAGAGCCT CGGCAGACGC
GGGCATGCAG TGACGGCCCT GTCGGCATTG TCAGAGGCCG CTGAAGTGCT GGTGGCAGAA
CGCCATGATG CTGTCGTGGT CGAGGCGACT CCCGGTGCGT GGGCTTTCTG CGAGTCCCTC
CGTCAGGGGG GATATGGCGC GAACAGGGCG GCCTTGCCCC TGGTGTTCAT CTGCGATGGC
GATACGTTCC TGCCCGAATC GGTGGAACCT CTGGCCGCTC CCCATGCGTT GCTGTCACGG
CCTGTCAAGG GGCGAGCCCT GTGTGAAGCC GTCGAGCATC TTGCAGGTGC CGATGCCGGG
CAGCCTGCAT CCGAGCGTGT GGCATTGCCG GAAGACGTTC CCCTGTTGCA GCCGGGGGCA
TTGCTGCTGA CCGCCCCCGA TGCCCAGATG CGGTTCGTGC GGCAGGTTCC CAGTCTGCGT
GAGAGCCTGT GGTCGGCCAT GGACAGGGGA AGCCGCGTCG AACTTGCCTC GCTGGCGCAT
CTTCTGCGTC ATGAGGCCGA GGGAATCGGC GCCTTGCGCC TGCAGGTGCT GGCTGAACGG
CTCGAGGACA GGGTTCGCAT CGGGGCGACC GAAGACGCGC GCCCGGTCTT CATGCTTCTC
GCCGATGCCC TCAACCAGCT TGAGCACGAC CTGCGCAAAC TCGTCCCCGC ACTATCCGAG
GACTGA
 
Protein sequence
MKDEAAGSAE VQALRERIAR LEDENRLLRL CARFEGPAPG EALGSLLPEI IAPASDAPLV 
YAYVSDMQTH ELLFVNRSLT MAVGAWQGRK CYELLQGRDT PCPFCTSGRL QRNPERPVVW
EWRNPRLGRW FRCIDRCIHW PDGRPVRYEL AVDITDMREA QEDLLRFRAA LDASAEAIFL
VDLEEGRFLD VNSGACTMLG YDRDTLLGLG LCGIRRSMAA DGCRQILDSI AAGAVLENVE
TVYLHRDGTF VPVEVGARLV DRAGGPRLAI MVARDVSEKR KARRAMEVRY LYEHVLSSCA
RELLSRSCSE STLVGVLGAL RQGAGACRAY IFENYEDAEG RLCCSQRYES SAPGVRPELD
NPALQNIIYA SEAPNWLHEL RKGRAVVGPV ADQPLPERDV LQAQGIRSLL VLPIFARGVW
CGFVGFDDTR TERTWQGGDI LFLQTASEIL GAALERHRAE AELAASHQRA EEASRAKSVF
LANMSHEIRT PLNAIIGLTE LTLQEPISQG VGENLRGVLH SAEALLAVVN DLLDLSRVES
GRLHLESVEF SPSRLARGVV RLMTHVADRK GLDFELYIAR DVPPTVTGDP ARLRQVLLNL
VGNALKFTDE GGVSLTVTPC ICSTDTGGGI LKGGNGGVRG LRFTVTDTGI GIPPDRQACI
FESFVQADES TARRFGGTGL GLAISRRLVE MMGGRLELRS EPGKGSEFWC DVPFASEGAA
RDGICEVACV ATHDAPSGTG RRPEGRGAGD RRLEAAPLRI LVVESDPLCR RAMVKSLGRR
GHAVTALSAL SEAAEVLVAE RHDAVVVEAT PGAWAFCESL RQGGYGANRA ALPLVFICDG
DTFLPESVEP LAAPHALLSR PVKGRALCEA VEHLAGADAG QPASERVALP EDVPLLQPGA
LLLTAPDAQM RFVRQVPSLR ESLWSAMDRG SRVELASLAH LLRHEAEGIG ALRLQVLAER
LEDRVRIGAT EDARPVFMLL ADALNQLEHD LRKLVPALSE D