Gene Dvul_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0795 
Symbol 
ID4664027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp977809 
End bp979044 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content66% 
IMG OID639819016 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_966243 
Protein GI120601843 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC GCCGCATGTA CGCCATTCTC GCCCTCATCC TGTGTAGTAT CGCCGTCGGC 
GTGTGGCTGT ATGCCCGACG GGGGACGGCC GACCCCGTCA TCCGCGAGAC GGCCACCGTC
ACCAGGGGCG AAGTGCGCAA GACGCTCGAA GCCACGGGCA TCATCAAGCC GCAGGTGGGC
GCCGTGGTCA AGACCGGTTC GCGGTTCACC GGTATCATCC GCAAACTGCA TGTGAAGGTG
GGCGACCGGG TCGAGAAGGA CGAGGTCATC GCCGAAATCG ACGACCGTGA ACAGCGCGCC
CAACTTGATG AGGCGGAGGC GAAGCTGCGG CAGGCCGAGG CCGAGGCCGC GCGCGTTGAG
ACCTCGTACC CGTTGCAGAT ACGCGAGGCC GAAGCGCAGG TGCAGGCCGC CCGTGCCGAA
AGCGAGTACG CCGCCCTGAC CATGGAACGG AAGCGCAAGC TGGTGGAACA GGACCTCGAC
GCCCGCAACA GCCTCGACGA GGCCCAGCAG CGGTCGCGCA GCCTCTCCAA CGTGCTGGTG
GCCCGTGAAG CGACGCTCGA CAGGCTGCGT AACGAATTCC GCACCGAGCG CAAGCGCACC
CGTCAGGCCG CCGAACAGGC GAAGGCGGCC CTTGAGACGG CGCGCATCCG CCTTTCCTAT
GCCGTCATCC GCAGTCCCAT CAGCGGTATC GTCAGTCAGG TGACGGCGCC CGAGGGCGAG
ACCGTGGTCG CCGGTTTTCA GGTGGTGAAC CTCATCACCA TCCTCGACCC GTCGCGTCTT
GAGATGTGGA TTTACGTCGA TGAGACCGAT GTGGGGCAGG TGCGTCCGGG GCTCGACGTG
GAGTTTCGCG TCGACTCCCA GCCCGAGAAG ACGTTCCGGG GCGTGGTCGA CCAGATATAC
CCGCAGCCGG AGATACGCGA CAACATCGTC TACTATCAGG CCCTCGTGCG TCTCGACCCT
GCCACATCCG AACACCTGCG CCCGGAGATG ACCACCCAGT GTCGCATCAT CGTCGCCAGC
AAGAAGGACG TGCTGGTGAT ACCCAATGAC GCCATCAAGT GGGTGGACGG CGGGCGTGTG
GTCTTCATCG ACGATGGTGG CAAGGTGCGG CGCGTCAAGC CCGTGCTTGG CACTGCGGGG
CCCGACGTCA CCGAGGTGGT GGAAGGACTG GCGGAGGGCC AGAAGGTGGG AGTGCGCGTG
GAGTTGCCCG GTGCCTCCAA GGGGGCACGC AAGTGA
 
Protein sequence
MTRRRMYAIL ALILCSIAVG VWLYARRGTA DPVIRETATV TRGEVRKTLE ATGIIKPQVG 
AVVKTGSRFT GIIRKLHVKV GDRVEKDEVI AEIDDREQRA QLDEAEAKLR QAEAEAARVE
TSYPLQIREA EAQVQAARAE SEYAALTMER KRKLVEQDLD ARNSLDEAQQ RSRSLSNVLV
AREATLDRLR NEFRTERKRT RQAAEQAKAA LETARIRLSY AVIRSPISGI VSQVTAPEGE
TVVAGFQVVN LITILDPSRL EMWIYVDETD VGQVRPGLDV EFRVDSQPEK TFRGVVDQIY
PQPEIRDNIV YYQALVRLDP ATSEHLRPEM TTQCRIIVAS KKDVLVIPND AIKWVDGGRV
VFIDDGGKVR RVKPVLGTAG PDVTEVVEGL AEGQKVGVRV ELPGASKGAR K