Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0680 |
Symbol | |
ID | 4663695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 843051 |
End bp | 843755 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639818897 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_966130 |
Protein GI | 120601730 |
COG category | [K] Transcription |
COG ID | [COG1378] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.027338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACCA TCCTCGCACT ACGCAAGTTC GGATTCACGC AGCAGGAGTC GTTGCTCTAC GTCACCCTGC TGCGCCACGG GGCCATGACG GGCTATGAGG CTGCCAAGGC TGCGGGCATC TCGCGTTCCA ACGCCTATGC CGCGCTTTCC AGCCTCGTCG AGAAGGGGGG CGCTGTGGTC GCCAGCGGTG ATGCCAGCCG CTATGTCCCC GTCCCCCGGC ATGAACTGCT TGGGAACCTG CGGCGCGACA CGGAGGCCAC GCTTGCCTTC CTCGATGCCA ACCTGCCCGA GGAACAGCCC GACGAGACGC CCTATCTCAC CGTCGCGGGA CTGGCGAACA CCGCCAACAA GATACGCAAC ATGCTGACGG GTGCGACGCT GCGCGTCTAT GCCTCGTTGC ATCACGAGAA TCTTGCCCTC TTCCGGCGTG AGTTCGAGGA TTGCGTGGCG CGCGGCCTCA AGGTCGTCAT CCTCTCCGAC ACCGACCCCG CCATCGCGGG GGCCGTATTT CTGAAGAACC GGGCTGGCAC CGGACATGTG AAGCTCATCG CCGACACCAG CGAGGTCATC GCGGGACTGC TGGAACCCGG CGTGAGCGGG CGGTGCCTGT ATTCGCGCAA CGAGCATCTC GTCTACCTCA TGCGCGAGGC CATCCTGCAC GAAATGGAAC TCATCCGCAT CCGCGAAGGC AAGGAAGCAG AGTGA
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Protein sequence | METILALRKF GFTQQESLLY VTLLRHGAMT GYEAAKAAGI SRSNAYAALS SLVEKGGAVV ASGDASRYVP VPRHELLGNL RRDTEATLAF LDANLPEEQP DETPYLTVAG LANTANKIRN MLTGATLRVY ASLHHENLAL FRREFEDCVA RGLKVVILSD TDPAIAGAVF LKNRAGTGHV KLIADTSEVI AGLLEPGVSG RCLYSRNEHL VYLMREAILH EMELIRIREG KEAE
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