| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0577 |
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| Symbol | |
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| ID | 4664592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 729834 |
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| End bp | 732851 |
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| Gene Length | 3018 bp |
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| Protein Length | 1005 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639818788 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_966027 |
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| Protein GI | 120601627 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0920445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAC GTAAGGACAA GCAACACGGT GCCCGGATGG TACAGGCCGA GAGCACCATC
CGGACCCTTC GTCGCGAGAG GGTGTTGCAC GATTCGCAGG TGGAACAACT GCGGCGTACC
GGGGCACTCT ATCGAAGCGT CTTCGAGCGC ATACCCGTCA TGGTCTTCGT GTGGCGCGTC
GCACGTGATG TGGGGGCATC ACGCCTTATC GACATGAATC CCCTTGCAAA GGCCTATCTC
GAGAATGTGC CCCGCAATGG CGATGACGGT TCGCCCGACT TGCCCGAATC CCCCGATTTG
CTCGGTTCGC TGCTGCCATG GCTTGTGGAA TCCCCCTTCG GGGAGGCCCT GCGCCGGGTC
CATGCGGAAG GGGGAACCCT CGAGATTCCG GCCCTGCGAC ATGGCGCAGC CGGTGGGGGA
CGATTCTGGC GGTGCATCTT CTGCAGACTG CCCCTTGGCG ATGTCATCGC CATATCCGAG
GACATCACGG CCGCGCAGGA GACCGGGGCG GCACTCGTAA CCAGCGAGCG CGGATACCGC
ACGCTGGTGG AGAACATTCC GGACATCGTG GTGCGCTTCG ATGCGCGTGG ACGGCTGCTC
TTTGCGAACC CGGCGTTACG TCGTTTCGTG CGCAGCAAGC GACTGCCCTC TGGTCACGTG
ACGGGGCAGC CACTTGGGCA GCAGCCTGCG ATGCTGCGTG AACTGCGGGA GAGAGTCCAG
CTGGCGATGT CCTCCGGTGA GGTGCAGCGG GCGGAGTTGG AAGAGCGCAC GCGGCAGGGG
CGCCGGTTCT TCGAGTGGCG TATCGTTCCC GAGCCCGCCC CTGATGGAGG GGACGCCACG
GTATTGTGCA TAGGCCGCGA CGTGTCGGCC ATGCGCAGGG CAACCGAGGA CTACCGCGCC
CTGTTCAACG GCATGCTGAG TGCGTTCGCA CTGCATGAGA TCATCTGCGA CGGGGCCGGA
GTACCCGTCG ACTATCGTTT TCTGGCCGTC AATCCGGCCT TCGAACGTAT GACCGGGTTG
CTGGCGTCCG AGATGGTGGG GCGCACGGCG CGGGATGTAC TGCCGGGATT GGAGAGCGAG
TGGTTGCAGC GCTACGGTCA GGTGGCCCTC ACGGGGGTTC CTGTGACGTT CGAGGCGTTC
AACCGTGATC TTGGCAAGTA TTTCAAGGTG TCGGCCTATC GGCCTGCCGA ACGCCAGTTC
GCCTGCATGT TCCATGACGT GACCGACCGG GTGCGCGGGC GCGAGGAGCG ACGCAGCAAT
GCCCGGCGTA TGGCGGCGTT GCAGCGCATC TTCCGCATGA AGGAGCCGGA GGAGGTGGTC
GCGCGGTATG CGTTGACGCA AAGTATGCAG CTGACGGGGG CACGGGTGGG CCGCGTGGTG
CTCCATGACC CCGAAACGCG GGTCATCAGG CATATCGTGG ACCATGGGGA CCCGCTCTTC
GGGACGGAAG GCTGGCAATG GGCCTCCGTG GCGCATGGCG GTGCCGGGGG GGATGATACC
GATGGGGGCG CGACAGGTGG CAGGGGCCCG GATGAGCCCG AGGGCATCGC AGGGCCGCGA
CGCGTGCCGC CCCAGCCCGA TGCCGGACAT GTCGCGGAAC CCGACCGGGC CCGTCTGGAC
GACTTGATGA CCCGGGCGGC GGCAGGCATG GGGCCGTTGG CCAGTGAACT CACCCATGGC
AGGCACGGGC CGCACGCCCG GCATCTTGCC GTCCCGGTCA GGCTCGACGG CAGACTTGGG
GCTGTGGCCG TATTGCTCGA CAAGCCTACT CCCTTCACCC GTGCCGACAT CAAACAACTC
GACCTGCTCA TGCGCGGGAT GCTCGAACAC CTCGAACGTC GTCGCTCGTT GCACAGGCTG
TCACTCGCCA AGGAGCATGC GGAATCGGCC AACAGGGCCA AAAGCGAGTT CCTTGCCAAC
ATGAGTCACG AACTGCGGAC ACCGTTGAAC GGCATGCTGG GGATGCTCCA GTTGCTGGAG
GCGGGCGACC TCGACCGTGA CCAGAACGAA CTTGTGCACA TCGCCCTCGA TTCGGGGCGC
ACGCTTCTGC GGGTCCTCAG CGACATCCTC GACCTGTCGC GCATCGAAGC CGGACGCATG
GAGTTGCGGC ACGACCGCTT TTCACCTGAA GAGGCAGTGC GGCAGGTGTA CGACATGTTC
GCGCAGGACG CGCGCATCAG GGGGCTTCGC CTGCGGTGGC GTTGTGACGA ACTGCCCTGC
GAGGTGTGGG GAGACGGTAC CAGACTGCGG CAGATACTCT TCAATCTGCT CGGCAATGCC
ATGAAGTTCA CGCACGAGGG GACTGTGGGG GTCGAGGTGT GCGCCGTGAG GCGTACGGAA
GAGAGTGTGC GGCTGCTGTT CTCCGTATCC GATACCGGCA TAGGGATTCC CCACGACCGG
CTCATGTCCA TCTTCGAGCC TTTCACGCAA CTCGACGGTT CGACGACGCG CAGATATTCG
GGGACGGGGC TCGGGCTTGG CATCGTACGC CGCCTCGTGC ATCTCATGGG CGGGGGACTC
AACGTCGAGA GCGCTCTGGG AGAGGGCACG GCGGTGCATG TCTGCCTGCC GTTCAGGCTT
CCCTCCGGTG GGGGGGTGAC CTGCGACGTC ATGGACAGCA CCCCTGCGCT GCGTCGCCCT
CTCAAGGTGC TTGTCGCCGA GGACGAGGCG GTCAACAGAA TGACCCTCAG CCGTTGCCTG
CATCATCTGG GACATGAGGC CGTCTGCGTC ACCAACGGGC TGGAAGCCGT CGAAGCCCTG
CGGGAGGGGC GTTTCGACTG CGTACTCATG GACATCCAGA TGCCCGAACT GGACGGACTG
GAGGCCCTCG CGCGCATTCG CGCCGAAGCT GGCGAACAGG CGCGTGCGTT GCCGCCGGTG
GTGGCGCTCA CGGCCCACGC CATGGAGGGC GACCGCGAGC GCTTTCTCGC GGCAGGCATG
AGCGCCTACA TCCCCAAACC CATCGAACTG GGCGAACTGG AGCGGGTGCT GTTGCGTCTG
GCGGCAGCCA TGCCCTGA
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| Protein sequence | MARRKDKQHG ARMVQAESTI RTLRRERVLH DSQVEQLRRT GALYRSVFER IPVMVFVWRV
ARDVGASRLI DMNPLAKAYL ENVPRNGDDG SPDLPESPDL LGSLLPWLVE SPFGEALRRV
HAEGGTLEIP ALRHGAAGGG RFWRCIFCRL PLGDVIAISE DITAAQETGA ALVTSERGYR
TLVENIPDIV VRFDARGRLL FANPALRRFV RSKRLPSGHV TGQPLGQQPA MLRELRERVQ
LAMSSGEVQR AELEERTRQG RRFFEWRIVP EPAPDGGDAT VLCIGRDVSA MRRATEDYRA
LFNGMLSAFA LHEIICDGAG VPVDYRFLAV NPAFERMTGL LASEMVGRTA RDVLPGLESE
WLQRYGQVAL TGVPVTFEAF NRDLGKYFKV SAYRPAERQF ACMFHDVTDR VRGREERRSN
ARRMAALQRI FRMKEPEEVV ARYALTQSMQ LTGARVGRVV LHDPETRVIR HIVDHGDPLF
GTEGWQWASV AHGGAGGDDT DGGATGGRGP DEPEGIAGPR RVPPQPDAGH VAEPDRARLD
DLMTRAAAGM GPLASELTHG RHGPHARHLA VPVRLDGRLG AVAVLLDKPT PFTRADIKQL
DLLMRGMLEH LERRRSLHRL SLAKEHAESA NRAKSEFLAN MSHELRTPLN GMLGMLQLLE
AGDLDRDQNE LVHIALDSGR TLLRVLSDIL DLSRIEAGRM ELRHDRFSPE EAVRQVYDMF
AQDARIRGLR LRWRCDELPC EVWGDGTRLR QILFNLLGNA MKFTHEGTVG VEVCAVRRTE
ESVRLLFSVS DTGIGIPHDR LMSIFEPFTQ LDGSTTRRYS GTGLGLGIVR RLVHLMGGGL
NVESALGEGT AVHVCLPFRL PSGGGVTCDV MDSTPALRRP LKVLVAEDEA VNRMTLSRCL
HHLGHEAVCV TNGLEAVEAL REGRFDCVLM DIQMPELDGL EALARIRAEA GEQARALPPV
VALTAHAMEG DRERFLAAGM SAYIPKPIEL GELERVLLRL AAAMP
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