Gene Dvul_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0558 
Symbol 
ID4664193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp700005 
End bp702290 
Gene Length2286 bp 
Protein Length761 aa 
Translation table11 
GC content68% 
IMG OID639818768 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_966008 
Protein GI120601608 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.409078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAC AGGCCCTTCT TCCCGGTATC ATCTTGCCCT CTCCGGTGGA TGAGGGCGTC 
TCTGAAGCCC CGCAACCCGA CGTGGCAGAC GGTGTGTCGT CCTGTGAAGC CAGCGACCTT
GCCTGTCCCG AAGGGACGGG GAGTGGTGAC ACGCCCTGTC ATTGCACGGA TAGTCATGAT
GATGTCATCG GATGCCCCGA CCACGAGACA GTAGGCGACG CGGAGTCGTC CGTCCCCGTC
CATGAACTGC CCCTCTTGCG ATGGCTTGGT GCAGCGGGCG GCCTTGCGCC CGGAGAACCC
GCACCGGGTG ACTCCGCCGC GGATGGCCCC TCCCTATGTG AGCCTGAAGC GGGCGAACTC
GCATCGGACG AGTCTGAACC TGTTGGATTC ACAACGGATA TGCCTGTGTC GGGCGGCTCT
TCATCGGGCG AACCCGTATC AGGAGCCTCT GTGACGGATG GTTTCACGGC GGGCGGGGAG
GCTGAGATGC CGGAGGCCTC TGACATCATG CCTGCGTTCG CGGATGCGCC CGACGCCTCT
GATGAGTTTG GCGCTGATGC GGGTCATGGC GGCTTGGATG AAGGCGACGG CGCGGGCGAC
GACGGTGAAG AGGGGGATGA GGCGCAGGCA TGGCCCCCGT TCACGCCGGA TGTGCTGGCA
TCGCTGTGCA CCGTCGAGGT GCAGGGGAGT GCCCATGCGT CCGCTGCGAC CGAGGATGGC
GATGGCGGTC ATATATTCCC TGAAGCGGAT GACGCAGTCT GCGGGGCCGC GTCCCAAGAG
GCCGCTTGCG ACGATACGGG CGACGTTTGC CACGGGGGTG CCGTCTTGGA AGACGCCAGA
CCGGCGACTG CCGCGGCTGA TATCGGTGCC GCTCATGCCG CCGTCCCCGA ATGCGGTGCA
GCACCGGAGG CCCTAGCTGG ACGTGATGGT GCCGAGGCGG TCTCCCTCGA CGCAGGACTC
TCCGGTGGCA GTGCCTCCGA TGGTCACGCC AAGGTTTCTG AATCTGCGTT CTGCGCCTCT
CCTGAAGTCG GTGATGCCGG GTGCTGTCTG CCTCCGCTGA CGGTACTCGG TCTCGGCACG
GGGGATACGG CGCTCTCTCC TGTCCATGAG TCGCTCTTGC GTGATGCGGA GGTGCTGGTG
GGCGGCAGGC GGCAGCTTGC AGCCTTCCGC GGGCACCCCG CGCGACAGGT GGTCATCGCC
TCGCCCGTGA CGGACGCCCT TGAAGCCGTC GCCCGCTTGC GTGAAGAAGG GCGGCGTGTG
GTGGTGCTTG CCGATGGCGA CCCGCTCTTC TTCGGCATAG GCACCCGTGT GGCCCGTGAT
TTCGGGCCCG ATGCCGTCCG GGTGGTGCCG TCCGTAAGCT GTCTGCAGGC GGCTGCGGCG
CGGCTTGGCA TGGCGTGGCA CGACACCGTG ACCGTCTCCA TGCACGGACG CGACGACTGG
CGGCCTCTCG CGGCGGCGGT ACTCGGCGGG CACCCCGTCT GCGTGCTCAC CGACGGCGTG
AACACGCCCG ACCGCATCGC CCGCCATCTT CTCGACCGCG GGGTGGACTG GTTCCGTGCG
CATGTCTTCG AGGACATGGG TACGGTGGAG GAACAGGCTC ACGACCTTTC GCTTGCCGCA
TGTGCCGCCC TCGACTTCGG GCCGTGCTGC ACCGTGCTTC TGGTGCCGCA GGGCGAGGTG
CGCGGCCCCC GCACCGGGAT GCCCGACACC TTCTTCGCCG CCGAGGCGGG GCTGCTCACC
AAATGGCCCG TGCGGGCGGT GGCCCTTGCC GCGTTGCGCG TGAACCCTGC GGCTACCGTG
TGGGACGTGG GTGCCGGTAG CGGTGCCATG TCGGTGGAGT GTGCCGCCGT CGCATCGCGG
GGTAGCGTAT GGGCCGTCGA ACGCGACGCT GCCCGCGTGG TCTGCGTGGA GGAGAATCGG
CGTCGTATGG GGGCGGCCAA CATCGAGGTC GTGCACGGCG ACGCCCCGGC GTGTCTCGCC
AGCCTGCCCA CACCCGACCG GGTGTTCATG GGCGGCGGTC TCGGTGGCAT CAGTGCCGAT
GCCTCCTGTC CGGTGCTGCA TACCGTCTGC GAGAGACTCG CCCCCGGCGG GCGCGTGGTC
GTGGCGTGCG TGCTGCTGGG CAGCCTCGAA AGGGCACTGG GGGTGTTCCG CAACCTCGGG
TGGCCCGCCG AGGTCGTCTG CGTACAGGCT TCGGTCTCGT CGCCTCTTGC CGGTGACATG
CGCCTTGCGG CGTTCAACCC CGTGCATCTT GTCTCTGCCG CACGGCCACA GACGGGAGGG
CAGTGA
 
Protein sequence
MNGQALLPGI ILPSPVDEGV SEAPQPDVAD GVSSCEASDL ACPEGTGSGD TPCHCTDSHD 
DVIGCPDHET VGDAESSVPV HELPLLRWLG AAGGLAPGEP APGDSAADGP SLCEPEAGEL
ASDESEPVGF TTDMPVSGGS SSGEPVSGAS VTDGFTAGGE AEMPEASDIM PAFADAPDAS
DEFGADAGHG GLDEGDGAGD DGEEGDEAQA WPPFTPDVLA SLCTVEVQGS AHASAATEDG
DGGHIFPEAD DAVCGAASQE AACDDTGDVC HGGAVLEDAR PATAAADIGA AHAAVPECGA
APEALAGRDG AEAVSLDAGL SGGSASDGHA KVSESAFCAS PEVGDAGCCL PPLTVLGLGT
GDTALSPVHE SLLRDAEVLV GGRRQLAAFR GHPARQVVIA SPVTDALEAV ARLREEGRRV
VVLADGDPLF FGIGTRVARD FGPDAVRVVP SVSCLQAAAA RLGMAWHDTV TVSMHGRDDW
RPLAAAVLGG HPVCVLTDGV NTPDRIARHL LDRGVDWFRA HVFEDMGTVE EQAHDLSLAA
CAALDFGPCC TVLLVPQGEV RGPRTGMPDT FFAAEAGLLT KWPVRAVALA ALRVNPAATV
WDVGAGSGAM SVECAAVASR GSVWAVERDA ARVVCVEENR RRMGAANIEV VHGDAPACLA
SLPTPDRVFM GGGLGGISAD ASCPVLHTVC ERLAPGGRVV VACVLLGSLE RALGVFRNLG
WPAEVVCVQA SVSSPLAGDM RLAAFNPVHL VSAARPQTGG Q