| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0546 |
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| Symbol | |
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| ID | 4663926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 685866 |
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| End bp | 688244 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639818756 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_965996 |
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| Protein GI | 120601596 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.482559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAC CAGCACTCCT CAGCCGTGAG GCGGAACTCT CGCGGCGCGA CCTCATCGCC
CTCGAATCCC GCCTCCGCGA AGCCGTGTCC CGTTTCCTGC CGTTCAAGGC CTACAGTCTC
TACTTCCCCC GCGAGGCGGA GACGGTGGAA CCCCTGTGGT TGCCCGGTGA GGGGCGGCTG
CTGCTGCCGC TCATCCATGG TGGCGCCCTG CTTGCCGTGT TCGTGGCCCG CGGGGTGCCC
CGGCGCATCG TGCGGTCGCT GATGCCCGCC TTCCCGGGGT TGCTGGCGCT GTGCATGGAG
AACCTCGCCC TCTACAAGGC CGGGCGCACC GATGCGTTGA CCGGGCTGTC CACCCGGCAG
CATCTCGTGG AACGGATGGC GCGCGAGGCC GACCATGTGC GCACCTGTTT CGCCAACCCG
CCCGAGGGCG AGGGAGACCT CGGTGCACCG TTGCACAGGG CCTGCATGGG ACTTGTGGTG
GTGCGTCTCG CCTCGCTGCG GCAGGTGGCG CGTGACCACG GCTACACCTT CGCCGACAGG
CTCACGACGG AGTTGGCCCG CGAACTGTCG GCCCTTGCGC CCGAACAGGC TCTTGCGGCC
CGCACCGGAG ACTACGAGTT CGCCCTGCTG GTTCCAGCGG CCGCCTCTGG CGTCTGCCGC
AAGCTGGCCG AAGAGGCCGT GCAACGCCTC AGCGCCGTGT CGCTGCGGTG CGGACTGACG
GAGAAGGCCG TTCGCGTCTG CGTGTCGGCG GGTTACGCCG TCTACCCCCG CGACATGGAG
GGGGCGCTGT TCGAGCGTGA TATGGCCGAA CAGGCGAGGG TGCTGCTGCG CAAGGCGCGT
CTGGCGGCAG CCGTTGCCGG TGAGGGTGAG GGCAGCGAAG GCCCCGGTGT GATGGGCTTC
GCCCGTATCC TCGCCGAGGG GGGGGCCGTG GTGGAGACGC ATCCCCTCTC GCGGGTGATG
GTGAATCTGG GCCGGAGCAT GAACGCCCGG GAGGGGCAGC GCTTCTCGGT GTGGTCGGTG
GCCTATCCCG TACGCGGGGG GACGCATGAA CCGCGTCAGC CACTCTACAA GGGCGAGGTC
GTGCTGCTTG AGGTGCGTGA AGACAGGAGC GTGGCTGAAA TCCTGCACCT TGGCGACCCG
ACGTGGCCCA TCGAACCCGG CGACAGGCTC ACCCTGCTGC CCGAGGAGAA GGGCGGTGAT
GCCCGGCGCG ATGCCCGCGG CGTGCAGGTG GACCCCCTCA CCGGATTGTA CCGGCATGGC
GACTTCCTCG CCCGCTGGAG TGAGGCACGC GAAGGTTGCG ACTGCTTCGC CCTTGCGCTG
GTCCGCTTCA GCGACGACGG GCGCGACCCG GAAGGGCGTG CCTCGCACCC CGAACAGCTC
ATGGCGGAGG CCGCCCAGCT GTGCCGCGAC CATTTCGGCG CAGAGACTCT GGGTGGGCGA
TACGGCCTGA ACAGCATCGT GTTCTTCCAC CCCGATATGA CATGCGACGC GGCGCGCGAA
AGCTACCGCC AGCTGTGCGA CCTGTTGTCG AAGCGTTTGC GCATCGACGC CGCGGTGGGG
GTGGGGTGCC ACCCCTTCCT CGCCTACCGC AGGGCGGACG CGCTGGAGAA CGCCCTCAAG
GCTCTCGAAT ACGCCTTGCT GCTGCCTGAA CCGCGTGTGG GCATCTTCGA TTCGCTGGCC
CTCAACATCA GTGCCGACAA ACGGTTCAGC CTCGGGGATA CGTTCGGGGC CATCGAGGAG
TACAAGACGG CCCTGCTGGC GGACGAAGGC AACACCATGG CGTGGAATTC GCTTGGTGTG
TGCATGGCGG GTCTCGGCAG GCACGGCGAG GCGCGCCGCT ACTTCGAACA GGCGCTGCAA
CGCAAGCCGG GCGACCCCAT GGCACTGTAC AACCTCGGTA CGGTCTGCCA GTCGCTGGGC
GAGACGGCCG AAGCCCGCAA GCACTACCGG AAATGCCTCA AGTACGCGCC GGGCCATGTC
TTCGCGCTGG TACGCCTCGG CCAGCTGGCC GAGGGTGAGA AGCGCTACGC GCAGGCCCGC
CAGTACTTCA ACAAGGCGGC CCGTGCGGGA GACTCCGGTG GCCTCGTCCA CCGCAACCTC
GCCCGCCTGT CCATGCGGCA GGGACGGCCC GACGAGGCCC GTGAACATCT GCACGACGCC
CTGCTGCGCA ATCCGCAGGA CGCCGTGGCC TTGCAGCTGA TGGCCCGTCT CTATCTCGAT
GGCGGAGAAG ACCCGGCCAT GGCCGAGGCC CTCTCCAGGC AGAGTGTCGC CCTGCGTCCC
GACCTCAAGC AGGGCTGGCT TGAACTGGCG CGTGCCCTCG ACGCCCGTGG CCATGTGGCT
GAAGCGCGCG AGGCCCGACT CAGGGCTGGC GAACGCTAG
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| Protein sequence | MTAPALLSRE AELSRRDLIA LESRLREAVS RFLPFKAYSL YFPREAETVE PLWLPGEGRL
LLPLIHGGAL LAVFVARGVP RRIVRSLMPA FPGLLALCME NLALYKAGRT DALTGLSTRQ
HLVERMAREA DHVRTCFANP PEGEGDLGAP LHRACMGLVV VRLASLRQVA RDHGYTFADR
LTTELARELS ALAPEQALAA RTGDYEFALL VPAAASGVCR KLAEEAVQRL SAVSLRCGLT
EKAVRVCVSA GYAVYPRDME GALFERDMAE QARVLLRKAR LAAAVAGEGE GSEGPGVMGF
ARILAEGGAV VETHPLSRVM VNLGRSMNAR EGQRFSVWSV AYPVRGGTHE PRQPLYKGEV
VLLEVREDRS VAEILHLGDP TWPIEPGDRL TLLPEEKGGD ARRDARGVQV DPLTGLYRHG
DFLARWSEAR EGCDCFALAL VRFSDDGRDP EGRASHPEQL MAEAAQLCRD HFGAETLGGR
YGLNSIVFFH PDMTCDAARE SYRQLCDLLS KRLRIDAAVG VGCHPFLAYR RADALENALK
ALEYALLLPE PRVGIFDSLA LNISADKRFS LGDTFGAIEE YKTALLADEG NTMAWNSLGV
CMAGLGRHGE ARRYFEQALQ RKPGDPMALY NLGTVCQSLG ETAEARKHYR KCLKYAPGHV
FALVRLGQLA EGEKRYAQAR QYFNKAARAG DSGGLVHRNL ARLSMRQGRP DEAREHLHDA
LLRNPQDAVA LQLMARLYLD GGEDPAMAEA LSRQSVALRP DLKQGWLELA RALDARGHVA
EAREARLRAG ER
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