| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0516 |
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| Symbol | |
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| ID | 4663180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 657988 |
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| End bp | 658998 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639818726 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_965966 |
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| Protein GI | 120601566 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0154508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCT TCAGCAGAAG AACCTTTCTC GGCATGGCCG GACTCACCGG CGCCGGTCTC
TGTCTCGGGC TGCCCGTGGG TGCCCGGGCG GCGCAGGCAC TGCCCGTGAC CGAAACCCGT
GTGCAGATGG GAACCTACGT CGGCATCACG GTCGCCGGAG TCTCCGCCAT GCAGGCGGAA
GAGGCCCTCG GGCGGGCCTT CGCGGAGGTG GCACGCCTCG AGGCGGTGTT CAGCCGCTTC
GACGGGGCGA GCCCCGTCAG TGAACTGAAC CGCGCCGGGC GTCTGCCTGA CGCACCCGCC
GAACTCGTCA CCCTCGTCGA CCGCGCCCGT CGCTACGGCA GCCTCACCGA CGGTGCCTTC
GACATCACCG TCCAGCCCGT GGTCGACCTC TTCCGGCGCA ACGGCAACCC GCGTGGAACC
ATGCATGTCG ACGAGGCCGA CCTCAAGGCC GCCCGTGAAC TGGTGGGGCT TGCCCACCTG
CAGTCCGGCA GCGGACGACT CGGCTTCGAC CGGTCGGGCA TGGGCATCAC CCTCGACGGC
ATCGCCAAGG GGCACATCGC GGACATGGCG TCCGCAGTCC TCACCGCGCA CGGCGTCACC
GACCACATCG TCAATGCGGG CGGCGACATC ATGGTGCGGG GCATGAAGGC TCCCGACACG
GCATGGCGCG TGGCAGTGGC CTCGCCCAAC GGAGGGGCCT CCTATCCCGA GACCGTGCGG
CTGACCGAAT GCGCCATCGC CACTTCGGGC ACATCCGAGG TGTACTTCGA CGCACGGCAC
CAGCATCACC ATCTCATCAC CCCTGTGGCA GGGCGCAGCC CCGCCAGTAC GGGCAGTGTG
TCCGTCATCG CCCCCACGGT GATGGAGGCG GACGCCCTCG CCACCGCGCT CTCTGTCATT
CCCCCGCAGG ACGCGCTGCG CCTTGTGGCA TCGCTGCCCG GTCGCGCCTG CTGCATCTTC
ACACGCGACG GCCGGCGCTT CACCTCGTCC AACTGGGCGA CCTTCGCCTG A
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| Protein sequence | MKTFSRRTFL GMAGLTGAGL CLGLPVGARA AQALPVTETR VQMGTYVGIT VAGVSAMQAE
EALGRAFAEV ARLEAVFSRF DGASPVSELN RAGRLPDAPA ELVTLVDRAR RYGSLTDGAF
DITVQPVVDL FRRNGNPRGT MHVDEADLKA ARELVGLAHL QSGSGRLGFD RSGMGITLDG
IAKGHIADMA SAVLTAHGVT DHIVNAGGDI MVRGMKAPDT AWRVAVASPN GGASYPETVR
LTECAIATSG TSEVYFDARH QHHHLITPVA GRSPASTGSV SVIAPTVMEA DALATALSVI
PPQDALRLVA SLPGRACCIF TRDGRRFTSS NWATFA
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