| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0505 |
|---|
| Symbol | |
|---|
| ID | 4662750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 646579 |
|---|
| End bp | 647088 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639818715 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_965955 |
|---|
| Protein GI | 120601555 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.481189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG CCGAACGTTT CACCGCCTGC CTTGCCGTGT CGGGCTTCGT GCATTTCGTG
GCTACGGGGC TGCACGCCAC CGCCGACCCT GCAACCTTCG AACGGGCGGT CTCCATCGTC
TGCGACCTCG CACCACCGGA AGCCGTCGTC AGATTCGGAG ACGCCACCTT CACCGGAGAG
GCGGACGCGA CCGACGGCAA GGCCACCGAG GATGAAGCAC GCAAGGCCAT GCGCCGCTAC
CTGCATGACG TGAGCGACGC CATCCACGCC CGTCGCCTGA CCACACCCGG CACCTCCGGC
TGTCTCGGCA CGGCATGGGT GAGCTTTGCC ATCCTCCCCG ACGGCAGGTT CATGCAGGCA
ACACTGACCA CCTCGTCGGG CAACCGCGTG CTTGACGGTG CGGCAGTGGA AGCCGTGCGC
CGCGCCAGCG GCACCGTGGC CCGTCCGCGC GCCACCGGAA GCGGCACCAT CACCCTCGTC
CTGCCCGTGA AGTTCCAGTT GGGGCTTTAG
|
|---|
| Protein sequence | MTPAERFTAC LAVSGFVHFV ATGLHATADP ATFERAVSIV CDLAPPEAVV RFGDATFTGE
ADATDGKATE DEARKAMRRY LHDVSDAIHA RRLTTPGTSG CLGTAWVSFA ILPDGRFMQA
TLTTSSGNRV LDGAAVEAVR RASGTVARPR ATGSGTITLV LPVKFQLGL
|
|---|
| |