| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0493 |
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| Symbol | |
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| ID | 4662677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 630294 |
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| End bp | 631304 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639818703 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_965943 |
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| Protein GI | 120601543 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.285006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACT TCTTCAAAGC CAACGCCATC GCTGCCATTG CCTGCATCGC GATGCTCGCG
GCGGGCTCTT ATGCCGAAGC CGCCAAGCGC ATCACCATCC GCCTTGCCCA CCCCATGGCA
CCGGGCAACA ACGTGACCCT CGGGTACGAG AAGTTCAAGG AGATCGTGGA AGCGAAGAGC
AACGGCAAGG TCCGCATCCA GCTTTTCGGC AACTGCATGC TTGGCAGCGA CCGCGTGACC
ATGGAAGCGA CCCAGCGCGG CACTCTTGAG ATGGCTTCGA GCTCATCCCC GAACATGGCC
AACTTCTCGA AGGAGATGAT GGTCTTCGAC CTGCCCTACA TCACCAGCCC CGAACATCAG
GAAAAGCTCT ACAAGGCCCT CGACGAAGGT GCCCTCGGCG AGCGCCTCGA CGCGATTGCG
GCGGGCATCG GCCTGAAGCC CATCATGTAC AGCGAATACG GCTACCGCAA CTTCGCCACC
ACCAAGAAGC CCATCAAGAC CGCCGACGAC CTCAAGAACC TCAAGGTGCG CACCACCGAC
TCCCCCATCG AAGTGGCTGT CGCCAGCGCC CTCGGCATGA ACCCCACTCC CGTCAGCTGG
GGCGAGACCT ACACGGCACT GCAGCAGGGC ACCGTCGACG GCGAAGGCAA CACCTTCGGC
CTGCTCAACG ACGCCAAGCA CACCGAAGTG CTGCGCCATG CCATGGATTC GGCGCACAAC
TACAGCATGC ACCTGCTCAT GATCAACAAG GCGTACTTCG ACAAGCTGCC CGCCGACGTG
CAGCAGATTC TGGTCGACTC CGGCAAGGAA GCCCTCGCCT ACCAGCGCGC CATCTCCAAC
GACCTCGAGA AGAAGGCCGA GCAGGCGTTC GTCGAGCGCG GCATCGTCAT CACCAAACTT
GCCCCCGAAG AGCGCGCCAA GATGCGTGAG CTGACCCGCC CGGTGTGGGA CAAGTTCAGC
AACGACATCC CCGCCGATCT CGTCAAGCTC GTGCAGGAAA CCCAGCAATA G
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| Protein sequence | MRNFFKANAI AAIACIAMLA AGSYAEAAKR ITIRLAHPMA PGNNVTLGYE KFKEIVEAKS
NGKVRIQLFG NCMLGSDRVT MEATQRGTLE MASSSSPNMA NFSKEMMVFD LPYITSPEHQ
EKLYKALDEG ALGERLDAIA AGIGLKPIMY SEYGYRNFAT TKKPIKTADD LKNLKVRTTD
SPIEVAVASA LGMNPTPVSW GETYTALQQG TVDGEGNTFG LLNDAKHTEV LRHAMDSAHN
YSMHLLMINK AYFDKLPADV QQILVDSGKE ALAYQRAISN DLEKKAEQAF VERGIVITKL
APEERAKMRE LTRPVWDKFS NDIPADLVKL VQETQQ
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