| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0492 |
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| Symbol | |
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| ID | 4664562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 628309 |
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| End bp | 630213 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639818702 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_965942 |
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| Protein GI | 120601542 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.189133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATC CCCAGAACAT GTCCATCCTG GACGCCCAAG GCGAATGCGG CGGCGCACAC
ATGGCCACCC GCCCCGGCAT CCTCGGCTGG CTCGACGCAA ACTTCGAGAA GCCCTTCCTT
GCGGTGGGCA TGCTCGCCAT CATCTTCATC ATCACCTTCC AGACCCTGTA CCGCTACATC
GGCGTACACA TGCACGAAGG GGCGTCTGCC GCCATCTGGA CCGAAGAGAT GGCCCGCTTC
ATCTTCATCT GGATATCCTA CCTCGCCCTG CCGGTTGCCA TCCGCAACCG GTCGAGCATC
CGGGTGGACA TCATCTACGA CCGCCTGCCC AAGCGTTTTC AGGAAATGTC GTGGGTCGTG
GTCGACCTGT GCTTCCTCGT GCTGGCAGGC ACCGTGCTGT GGCAGTCGCT CGACCTCATC
AAGATGCAGA TCGAGTTTCC GCAGACGACC CCTGCCCTCC AGATTTCCTA CTACATCCCC
TATCTGGTGC TGCCCGTGAG CTTCGGTCTC ATGGCGCTCC GCCTCGTCGA AGACCTTTTC
GCACAGGCCC GCGTCTGCGG CCTCAAGGAC ACCCTGCTCG CGCTGGCCGC CTGTGCGGCC
CTCGCCGCCC CCGTAATGCT GGCCGAAGAC CTCGAGCCTC TGCCCGTCCT CTTCGGTTAC
TTCGCCATCT TCCTCGCCGT GGGCGTGCCC ATCGCCATCG GCCTCGGCCT TGCAGCACTG
GCGACCATCA TCGCCGCCGG GACCCTGCCC ATCGAATACA TCGCGCAGGT GGCCTTCACC
TCCATCGACA GCTTCCCCAT CATGGCCATC CCCTTCTTCA TCGCTGCCGG GGTGTTCATG
GGCGCGGGCG GTCTCTCGCG CAGGCTTCTC ACTCTTGCCG ACGAGATGCT CGGTTCGCTG
CATGGCGGCA TGGCCCTCGC CACCATCGGC ACCTGCATGT TCTTCGCCGC CATCAGCGGG
TCCGGCCCCG CCACCGTGGC TGCCATCGGG TCGCTCACCA TCCCCGCCAT GGTCGAGCGC
GGCTACGACA AGTACTTCTC CGCCGCAGTG GTGGCAGCCG CCGGTGCCAT CGGCGTCATG
ATTCCCCCGA GCAACCCCTT CGTGGTCTAC GGCGTCTCGG CGCAGGTCTC CATCGGGAAG
CTCTTTCTGG GCGGCATCGT GCCCGGAGTG CTCACCGGTC TGGCCCTCAT GGTCTACAGC
TACTGGTACT CCAAGAAGCG CGGCTGGAAG GGTGAAGTGC GCGTGCGCAA CCTCAGGACC
TTCACCAGGG CCCTGTGGGA CGCCAAGTGG GCCCTCATGG TTCCGGTCAT CGTCCTCGGC
GGCATCTACG GCGGCATCAT GACCCCCACC GAAGCCGCAG CGCTGGCCGC CTTCTACGGA
CTGTTCGTGG GCTGCTTCAT CCACCGCGAA CTCAACTGCG GCAGCCTCTA CGACTGCATC
GTCGAAGCCG CAGGCACCTC GGCCGTCGTC ATCGTGCTCA TGGCCATGGC CACCATCTTC
GGCAACATCA TGACCATCGA AGAGGTGCCC ACCGCCATCG CCACCGCGAT GCTCAACCTC
ACCGAGAACA AGATAGCCAT CCTGATGCTC ATCAACGTGC TGCTCATCGT CATCGGCACG
TTCATGGAAG CACTGGCGGC CATCGTCATC CTCACCCCCA TCCTGCTGCC CATCGTGCTG
AAGGTGGGTG TCGACCCCGT GCACTTCGGC GTCATCATGG TGGTCAACCT CGCCATCGGC
TTCGTGACCC CGCCCGTGGG CGTGAACCTC TTCGTCGCCA GCGGCGTGGC CCACGCCAAG
ATAGAGCACC TCTCCAAGGT GGTCATGCCG CTCATCGCCA TCATGATAGG CGTGCTGCTG
CTCATCACCT ACGTCCCGGC CCTCCCGATG TTCCTCGCGG AGTAG
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| Protein sequence | MSNPQNMSIL DAQGECGGAH MATRPGILGW LDANFEKPFL AVGMLAIIFI ITFQTLYRYI
GVHMHEGASA AIWTEEMARF IFIWISYLAL PVAIRNRSSI RVDIIYDRLP KRFQEMSWVV
VDLCFLVLAG TVLWQSLDLI KMQIEFPQTT PALQISYYIP YLVLPVSFGL MALRLVEDLF
AQARVCGLKD TLLALAACAA LAAPVMLAED LEPLPVLFGY FAIFLAVGVP IAIGLGLAAL
ATIIAAGTLP IEYIAQVAFT SIDSFPIMAI PFFIAAGVFM GAGGLSRRLL TLADEMLGSL
HGGMALATIG TCMFFAAISG SGPATVAAIG SLTIPAMVER GYDKYFSAAV VAAAGAIGVM
IPPSNPFVVY GVSAQVSIGK LFLGGIVPGV LTGLALMVYS YWYSKKRGWK GEVRVRNLRT
FTRALWDAKW ALMVPVIVLG GIYGGIMTPT EAAALAAFYG LFVGCFIHRE LNCGSLYDCI
VEAAGTSAVV IVLMAMATIF GNIMTIEEVP TAIATAMLNL TENKIAILML INVLLIVIGT
FMEALAAIVI LTPILLPIVL KVGVDPVHFG VIMVVNLAIG FVTPPVGVNL FVASGVAHAK
IEHLSKVVMP LIAIMIGVLL LITYVPALPM FLAE
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