Gene Dvul_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0474 
Symbol 
ID4662070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp603119 
End bp603538 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID639818683 
Productnickel responsive regulator 
Protein accessionYP_965924 
Protein GI120601524 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0139967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCA CCATCCGCTT CGGCGTATCA CTCGACTCCG AGCTTCTGGA CAAGTTCGAT 
GTCCTCTGCG ATGAACGCTG CTACCAGACC CGTTCCGAAG CCATCCGCGA CCTCATCCGC
AACACGCTGG TTCAGCAGGA ATGGGAAGAC ACCGACCGCG AAATCGCCGG TACGCTCACC
CTCGTCTACG ACCACCACAA GAGCGACCTC GCACAGCGAC TCACCGAGAT ACAGCACGAC
GTGCACGACA TCATCATCAC CTCGCTGCAT GTGCACCTCG ACCATTACAA CTGCCTTGAA
GTGCTCGTCC TCAAGGGCCC CGGCCAGCAG GTGCGCAACC TCGCGCAACG GCTCATATCC
ACCAAGGGCG TGAAGCACGG CAAGCTTTCG CTCACCACAA CCGGACAGGA CCTCACCTAG
 
Protein sequence
MGRTIRFGVS LDSELLDKFD VLCDERCYQT RSEAIRDLIR NTLVQQEWED TDREIAGTLT 
LVYDHHKSDL AQRLTEIQHD VHDIIITSLH VHLDHYNCLE VLVLKGPGQQ VRNLAQRLIS
TKGVKHGKLS LTTTGQDLT