Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0474 |
Symbol | |
ID | 4662070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 603119 |
End bp | 603538 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639818683 |
Product | nickel responsive regulator |
Protein accession | YP_965924 |
Protein GI | 120601524 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0139967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACGCA CCATCCGCTT CGGCGTATCA CTCGACTCCG AGCTTCTGGA CAAGTTCGAT GTCCTCTGCG ATGAACGCTG CTACCAGACC CGTTCCGAAG CCATCCGCGA CCTCATCCGC AACACGCTGG TTCAGCAGGA ATGGGAAGAC ACCGACCGCG AAATCGCCGG TACGCTCACC CTCGTCTACG ACCACCACAA GAGCGACCTC GCACAGCGAC TCACCGAGAT ACAGCACGAC GTGCACGACA TCATCATCAC CTCGCTGCAT GTGCACCTCG ACCATTACAA CTGCCTTGAA GTGCTCGTCC TCAAGGGCCC CGGCCAGCAG GTGCGCAACC TCGCGCAACG GCTCATATCC ACCAAGGGCG TGAAGCACGG CAAGCTTTCG CTCACCACAA CCGGACAGGA CCTCACCTAG
|
Protein sequence | MGRTIRFGVS LDSELLDKFD VLCDERCYQT RSEAIRDLIR NTLVQQEWED TDREIAGTLT LVYDHHKSDL AQRLTEIQHD VHDIIITSLH VHLDHYNCLE VLVLKGPGQQ VRNLAQRLIS TKGVKHGKLS LTTTGQDLT
|
| |