| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0418 |
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| Symbol | |
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| ID | 4663127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 535525 |
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| End bp | 537243 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639818622 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_965868 |
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| Protein GI | 120601468 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGGGC TGATGGAGTT GTACGGTCTT TCGGCCGCCG ACCCCGAGTG TGCGGCGCGT
CTTCCGTCCG GCGTACTGCT GGATGGAGGG TCCCTGTCAC ATCATCCGGC GCCCATGCTC
TTCATCGAAC CGGAGTCGGG CGGCATCGTC GAGGCCAACC GTGCCGCGTG CGCCTTCTAT
GGACACCCGT TCGAACGTCT TTGCACGATG TTCATCGACG ACATCAACAT GCTGCAACGG
GATGAGATAC TGGCCCGACG CAGGGCCGCC GCGACGGGAC TGGCGAACAG GTTCTCCATG
CCGCATCGCC TTGCGACCGG TGAGGTGCGC GAGATGCTGG TGCATTCGCA CCCCGTCATG
GTGGGCGAAA GGCAGTTGCT GTTCTCCGTG GTGCACGACG TCACCGAATG TTCACGCATG
GGCGAGGCGT TGCGCAGCCG CGAAGAACGT CTCGAACTGG TGGCGAGTTC AGCGACGCTG
GGCCTCTGGG ACTGGGATGT GCGCACAGGG CGGCTTTCCG TGAATCCGGG GTGGGTGGCG
TTGCTCGGTT TCCCGGCGGG CTGGACGCAG CGGGGCATCG ACGACTGGAT GGAACGCATC
CACCACGCCG ACCGCAATCG CGTGCTCACG GCGCTCAACG CCCACCTTGA GGGGCGCACG
GACAGGTACG AGGCGGAGTA CCGCATCCAT GACGGGGGCG ATGCCCTGCG CTGGGTGCAT
GATCAGGGGC GGGTGGTGCG GCGTGATGCC GTCGGCGTTC CGGCGCGTGT CATCGGTCTG
TTCATGGACG TGACTGCGCG GCGTTATGCA GAGGAGTCGC GGGCGCGGCT TTTCGAACTG
TCTCTCGACA TGCTGTGCAT CCTCGACTTC GAGGGGCGAT TCCACGAGGT CAATCCGGCG
TGGAACAGCA CCCTTGGCTG GATGGTGTCC GAGATGCTGG AGACGTCGCT GGGAGGGCTC
ACCCATGAGG CTGATGCCAC TGCCGTGGCG CAGGCTCTTG ACCAACTCGC AGCAGGTGAA
CGGGTCCGGG GGCTTGAGGT TCGGTTGAGA TGCAGCGATG GCACATGGAG GTGGCTGTCG
TGGAGTGCGC GCCCCGAGGT CGAACAGAGA CGCATCTACG CGGTGGTGCG CGACGTCACG
CACCAGAAGC GGCAGGAGGT CGAACTGCGG CGGATGGCCT CGATGGATGC GCTCACAGGC
GTCTCGAACA GGGCGACATT CATGGAGACC CTGGCCGACA TGATGCAGCG TTGCTGTCAT
GACAGGGCGG TGGCTTCAGT CCTTGTCATG GATGTGGACA ACTTCAAGCT GGTCAATGAC
ACGTGGGGGC ACGCCGTCGG GGACGAGGTG CTGCGGCGGC TTGGCCGTGC GATGGTGCCC
CTGTTGCGCA CCGTCGACAC CGTGGGTCGT CTGGGGGGGG AGGAGTTCGG CGTACTCTTG
CCGGGCGTGG GGCCCGAGGC GGCGTGCTGT GTGGCGGAAC GGTTGCGGGC AGCCATCGCA
GCCATGGAGG TGCCGTGCGA CGACGGACGG GGTGAGGCCT TGCGGGTCAC GGTCAGTGTG
GGGGTCGCGT CGTGTCCTCC CTATCATTCC GTGACCGAGG TGCTGCGTGC CGCTGACAAG
GCCCTCTACC GCGCCAAGGC CTCGGGACGT GACCGTGTGG TGTGCGGCCC GGTGGCCCTT
CTCGAGATGT CATGCCCCGA GTCGCCTACC ATTCCTTGA
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| Protein sequence | MRGLMELYGL SAADPECAAR LPSGVLLDGG SLSHHPAPML FIEPESGGIV EANRAACAFY
GHPFERLCTM FIDDINMLQR DEILARRRAA ATGLANRFSM PHRLATGEVR EMLVHSHPVM
VGERQLLFSV VHDVTECSRM GEALRSREER LELVASSATL GLWDWDVRTG RLSVNPGWVA
LLGFPAGWTQ RGIDDWMERI HHADRNRVLT ALNAHLEGRT DRYEAEYRIH DGGDALRWVH
DQGRVVRRDA VGVPARVIGL FMDVTARRYA EESRARLFEL SLDMLCILDF EGRFHEVNPA
WNSTLGWMVS EMLETSLGGL THEADATAVA QALDQLAAGE RVRGLEVRLR CSDGTWRWLS
WSARPEVEQR RIYAVVRDVT HQKRQEVELR RMASMDALTG VSNRATFMET LADMMQRCCH
DRAVASVLVM DVDNFKLVND TWGHAVGDEV LRRLGRAMVP LLRTVDTVGR LGGEEFGVLL
PGVGPEAACC VAERLRAAIA AMEVPCDDGR GEALRVTVSV GVASCPPYHS VTEVLRAADK
ALYRAKASGR DRVVCGPVAL LEMSCPESPT IP
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