| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0414 |
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| Symbol | |
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| ID | 4663203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 528379 |
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| End bp | 530058 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639818616 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_965864 |
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| Protein GI | 120601464 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.761548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACC AGCCCCCTGC CCCCCCTCCA CGGCACGCTC TCGACGCGCT TGTGGATGTC
ACCACGCGCC GCCCCCGACT GTCGCGGCTG CTTTCGCTCG TCGCCGTACT GGTGCTCGGT
GCCGCCTGTA TCGTGGTGTT CTCCATATAT GCCCGCACGA TGGATGAAAT CCGCAGGGAC
CACAGACACA TCGCGGAACG GCACGCCCGC GAGGTCGAAT ACTTCATGGA GTCACGTCTT
GATACGGCCC AGGCCATCGC CGACATGGGC AGCAGCCTCC TGAACGAAGG TAGCCCCCCC
CTGCCCTGGG TCGCCGATGC CCTTGCCCCC GTCCCCGAAC GTTACGGCTA TGCGCTGAAT
CATGACAGCG CACCGCCGTT CACAGCCGGA AGCTCACTCA CGGGACTCGG CCCTGTGCCC
CTGACGCATG ATACCCTGCG AGAGATGACC ATGTCGCTAC GGCTGCTCAT CCTCTTGCGC
GAGGTCTTCC AGCGCGACAA CACCACCCCG TGGGTCTATT ACACCTCGGA ACGAAGGTTC
ATGCTCATTC ACCCGGCGGC GCCCCCTTCA TCCTTCTTTT TCGAGGACAT CGTACTGGAA
CTGCCCTTTC ATACGCTGGC GCGCCCGGAC GCCAACCCGG CACGCGCCCA TTATCTTACC
CCGCCCTACC TCGATACGGC GGGAAAGGGC TGGATGGTGA CAGCCGGTGG CCCCGTCTAT
GAACGTGACA TCTTCAGGGG CAGCCTGTGC ATCGACATCT CGTTGCGGCA ACTTCAGGGC
ATCGCAAGCC ACCACCTCAA GCACGATGTA CGCATCGTCA TCACCACGCC CAAGGGGGAG
TTGCTCGCTG ACAGCGCCAT GGAAGGCGAC ATGTCGACGC ACGACAGCCT GCTGGCATTG
CCGCAGCACC TCTCTCAAGC GATGGCCGAC ATCAGGTCGC AACGCGAGGT GGGCGTGATG
CATGCCGGGT ACACCGTGTT CCATGTCCCG CTGAACGACC TCGGCTGGCA TCTGCTCCTT
ACCATGCCGA CACGCAACAT CGCCAACGAC GCGCTCTTCG CGGCCCTGCC TGTCGGGGGC
ATCCTCGTAC TGCTGGCCGT CAGCATCTGG CTGCTCTACA TCCTTGCCGT GGCCTTGCGC
ACGAATCGTG AACTCTCCAT CCGTGACAGT CTCACCGGGC TGCACAACAG GCGCTTCTTC
GACGAGGTGC TGGCCATGGA ACTGGCACGG GCGGCACGGG GGGAACGGGG ATTCGGGCTG
CTCATCGTGG ATGTCGACCG CTTCAAGGAG TTCAACGACA CCTACGGACA CGCCGAAGGC
GACCTCGCCT TGCAACATCT GGCGCGCGTT CTCGTGTCAT CTTCGCGCGA ACTTGTGGAC
ATGGCGTACC GTCTTGGCGG CGAGGAATTC GCCATCATCG CCCATGTGGA CGACGCGCTT
CAGCTGGATG ACGTGGCACG CCGGGTATGC GCAGAGTTGC GAAGCCTTTC GCTGCCCCAC
ACCGCAAGTC GAAGCGGTAT CCTTTCGGTC TCCATCGGCG GGGCCATGCT ACAGTCGGGC
GAGGTCTCCA CGGCGGACAC ACTCTACCGC AGGGCCGACA CGGCACTCTA CCGCGCCAAA
CAGGCCGGAC GTGACACGCA CTGGATAGAC GGGCTTACAC ACCCCGCCCC TTCACTCTGA
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| Protein sequence | MQHQPPAPPP RHALDALVDV TTRRPRLSRL LSLVAVLVLG AACIVVFSIY ARTMDEIRRD
HRHIAERHAR EVEYFMESRL DTAQAIADMG SSLLNEGSPP LPWVADALAP VPERYGYALN
HDSAPPFTAG SSLTGLGPVP LTHDTLREMT MSLRLLILLR EVFQRDNTTP WVYYTSERRF
MLIHPAAPPS SFFFEDIVLE LPFHTLARPD ANPARAHYLT PPYLDTAGKG WMVTAGGPVY
ERDIFRGSLC IDISLRQLQG IASHHLKHDV RIVITTPKGE LLADSAMEGD MSTHDSLLAL
PQHLSQAMAD IRSQREVGVM HAGYTVFHVP LNDLGWHLLL TMPTRNIAND ALFAALPVGG
ILVLLAVSIW LLYILAVALR TNRELSIRDS LTGLHNRRFF DEVLAMELAR AARGERGFGL
LIVDVDRFKE FNDTYGHAEG DLALQHLARV LVSSSRELVD MAYRLGGEEF AIIAHVDDAL
QLDDVARRVC AELRSLSLPH TASRSGILSV SIGGAMLQSG EVSTADTLYR RADTALYRAK
QAGRDTHWID GLTHPAPSL
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