Gene Dvul_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0340 
Symbol 
ID4662094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp432746 
End bp434899 
Gene Length2154 bp 
Protein Length717 aa 
Translation table11 
GC content64% 
IMG OID639818542 
Producthypothetical protein 
Protein accessionYP_965790 
Protein GI120601390 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.491762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.765012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACA GCAAGACGCT GAAGGAATAC CGCAAGGAAC TGCAGGAGTC GCTGGACAAC 
GAATTCCTGC GCAACGCCAT GGACAAGTTC GCCGTGGCCT ACCGCGCCAG CCGCGCCAAC
GCCTTCAAGG ACATCGACGA GAAGGCCATC ATCGCCGAAG TGGCCGACGC GAAGGACCAC
GCCGCCAAGA ACATGGACGC CCTCTACGCC CAGTTCAAGG CCGAGGCCGA GAAGCGCGGC
GTGAAGGTGC ACCTTGCACG CACCGCCGCC GAAGCCAACG AGATCATCGC CCGCATCGCG
CGTGACAACA ACTGCAAGAA GGCCATCAAG TCCAAGTCGA TGACGGCGGA AGAGACCCAC
CTCAACCACC GCCTCGAAGA GGACAACGTC GAAGTCATCG AGACCGACCT TGGCGAATGG
ATCATCCAGA TGCGCCATGA AGGCCCCTCG CACATGGTCA TGCCCGCCAT CCACCTGTCG
CGTTATCAGG TGGCCGACCT GTTCAGCGAA GTGACCAAGC AGAAGCAGGA AGTCGACATC
CAGCGTCTGG TGAAGGTGGC ACGCCGTGAA CTGCGCACCC ACTTCGCCAC CGCCGACATG
GGCATCTCCG GCGCCAACTT CGCCGTGGCA GAGACCGGCA CCATCGGCCT CGTCACCAAC
GAAGGCAACG CCCGTCTCGT CACCACCCTG CCCCGCGTGC ACGTGGCCCT TGCCGGTCTC
GACAAGCTGG TGCCCACCCT GCACGACGCC CTGCGCTCGC TGAAGGTGCT GCCCCGCAAC
GCCACCGGTC AGGCCATCAC CTCCTATGTG ACGTGGATCG GCGGCGCCAA CGAGTGCGAA
GCCTGTGTCG ACGGTCGCAA GGAGATGCAC ATCGTGTTCC TCGACAACGG TCGCCGTGCC
CTCGCCGAAG ACCCGTTGTT CTCACAGGTA CTGCGCTGCG TGCGCTGCGG CGCATGCGCC
AACGTGTGCC CGGTCTACCG TCTGGTTGGC GGCCACAAGA TGGGCCACAT CTACATCGGC
GCCATCGGCC TCATCCTCAC CTACTTCTTC CACGGTCGCG ACAAGGCCCG CAACCTGGTG
CAGAACTGCA TCAACTGCGA GTCGTGCAAG CACATCTGCG CCGGTGGCAT CGACCTGCCG
CGCCTGATCA AGGAAATCCG CGCCCGCCTG AACGAAGAGG AGGGCATGCC CGTCGAGACC
ACGTTGATGG GCAAGATGCT GAAGAACCGC AAGCTGTTCC ACACCTTGCT GCGCTTCGCC
AAGTGGGCGC AGAAGCCCGT CACGGGCGGT ACCCCCTACA TCCGCCACCT GCCGCAGATA
TTCGCCAAGG ACCATGGCTT CAAGGCGCTG CCCGCCATCG CCGACAAGCC CTTCCGTGAC
GAATGGGAGA CCGTGCGCCC GCGCATCGCC AACCCCAAGC TGCGCATCGC GCTGTTCTCG
GGTTGCGTGC AGGACTTCGT CTACCCCGAG CAGATGAAGG CCGCCGTGAA GGTCATCGCC
AGCCAGAACG TGGACATCGA CTTCCCCATG GACCAGAGCT GCTGCGGCCT GCCCGTGCAG
ATGATGGGCG AGCGCGAAGC CACCATCGAA GTGGCCCGCC AGAACGTCAT GGCCTTCGAC
GCGGCACGGT ACGACTACAT CGTCACCCTG TGCGCCTCGT GTGCCTCGCA CCTGAAGGAG
ACCTACCCCA AGCTGCTCAC CGGGCATCCC GAGATGACCA CCCGCGTGCG CCAGTTCTCC
AGCAAGATCA TCGACTTCAG CTCGTTCGTC CATGACGTGC TGGGCATGAA GTCCGATGCC
TTCAAGGGCG GCTCCAACGA GAAGGTCGCC TACCACAGCT CGTGCCACCT GTGCCGTGGT
CTTGGTGTGG TGGAACAGCC CCGCAACCTC ATCGCCGCCT CCGGCGCGAC CTACTGCAAG
GCCGAAGAAG AGGACGTGTG CTGCGGCTTC GGCGGGACGT TCTCCGCCAA GTTCCCCGAA
CTCTCGGCGG AACTCCTGCG CAAGAAACTC GACAACGTCG AAGCCACAGG CGCAGGTCGC
CTCGTGGCCG ACTGCCCCGG GTGCATCATG CAGCTTCGCG GCGGCATGGA GAAGCGCGGC
GGCAAGGTCA AGGTCGGCCA CGTTGCCGAA CTGCTGGCCG AGAACCTGAA ATAG
 
Protein sequence
MQNSKTLKEY RKELQESLDN EFLRNAMDKF AVAYRASRAN AFKDIDEKAI IAEVADAKDH 
AAKNMDALYA QFKAEAEKRG VKVHLARTAA EANEIIARIA RDNNCKKAIK SKSMTAEETH
LNHRLEEDNV EVIETDLGEW IIQMRHEGPS HMVMPAIHLS RYQVADLFSE VTKQKQEVDI
QRLVKVARRE LRTHFATADM GISGANFAVA ETGTIGLVTN EGNARLVTTL PRVHVALAGL
DKLVPTLHDA LRSLKVLPRN ATGQAITSYV TWIGGANECE ACVDGRKEMH IVFLDNGRRA
LAEDPLFSQV LRCVRCGACA NVCPVYRLVG GHKMGHIYIG AIGLILTYFF HGRDKARNLV
QNCINCESCK HICAGGIDLP RLIKEIRARL NEEEGMPVET TLMGKMLKNR KLFHTLLRFA
KWAQKPVTGG TPYIRHLPQI FAKDHGFKAL PAIADKPFRD EWETVRPRIA NPKLRIALFS
GCVQDFVYPE QMKAAVKVIA SQNVDIDFPM DQSCCGLPVQ MMGEREATIE VARQNVMAFD
AARYDYIVTL CASCASHLKE TYPKLLTGHP EMTTRVRQFS SKIIDFSSFV HDVLGMKSDA
FKGGSNEKVA YHSSCHLCRG LGVVEQPRNL IAASGATYCK AEEEDVCCGF GGTFSAKFPE
LSAELLRKKL DNVEATGAGR LVADCPGCIM QLRGGMEKRG GKVKVGHVAE LLAENLK