| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0331 |
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| Symbol | |
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| ID | 4665061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 421075 |
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| End bp | 423942 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639818532 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_965781 |
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| Protein GI | 120601381 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.383184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATGC GCACCCCGAA AAACCCCGGC GAAGGCCTCG CCCACCAGTC GTTGCTTCGT
CTCGCACCGG GTGGCCCCAT ACTGGGCCCG GTGCTTTCGG CAATACGTAT CCCGGCTTTC
ACGCTCGACA GCGACGGACT GGTCGTCTTC ATGAACGACC CCTTCCTCGA CCTTGTGCTA
CGCCCTGCGG CAGACCTTCT CGGCAAGCCA CTCTCCGTCG TCGTGCCCGC CATACATGCC
CCTCTCGTGG CTCGGGCCGC GGCAGACATC CTTGCGGGAA CGTGCGACGA CCTTCTCCTG
CCCGTCTCGG GGCAAGGCGG CACCGCCCTG CCCGTCCGTT TCAGGACGGT TCACGCCGTC
GATGCCGAAG GGGCCCCTGT CTGCCACGCA TTCGCCACCC ATGCGCTGCC CAGACGGCAT
GACGAGAGCC TCCGCTATGC CGAATTGTTC CATCTCTGCC CCGTACCACT GTGGCAACAG
GACGTAACAG AGGCACAGCA GGCCATCGAC ACACTGCGCA CATCGGGCGT CCACGACCTG
CGGGCCTATT TCGAGGCCCA CCCCCACGTA CTTGCCGAAT TCGCGCGGCG CATCCGCATC
GTCGATGCCA ACGAAACCGC CTCCGGGCTC TTCGCCGGAT GCCGTGAAGA CCTGCTCGAC
CCCGACCTTT TCATGCGCCT CGGCATGCGC CAGTTCGTCA TGGAACTACT TGTGATGCTC
GCCTCGGGGG CTGACAGGCT TTCTGTGGAA GCGGCTTGCC GCGCCCTCGA CGGTGGAGAA
CGCGCCCTGC AAATCGAAGC CCGCCTCATG CCCGGCTTCG GCCTGACTGG CATGAGAGTC
ATCGCCTGCG GCACCGACAT CACCGAACGC AACCGCTCGC AGGCGGCCCT TGCCGACTTC
CGCAACCTCG TCGAGGCCAT GTCGGACAAC ATGATCGACA TGCTCTGGGC CAAGGACACG
GAATGCCGCT ATATCTTCGC CAACCGTGCC ATCCGTGAGA ACCTGCTGCA CAGCGATGAC
GAAAGGGTGC TCGGCAGGAC CGACCTCCAC TTCGCCGAAC GCCAGAGGCG TCTCGGGCAC
GAGCACACCT TCGGCGAACT CTGCATCGAC AGCGACAGGG TGGTTCTGCA GACCCGCACC
TCCGGAAGGT TTCGTGAGGA CGGCAAGGTG CAGGGGCGCT ACCTCATGCT CGACGTGCAG
AAATCGCCAC TCTACGACAG ACAGGGCAAA CTGCTGGGCA CCGTGGGCAC GGGACGCGAC
ATCACCCTGC TCAAGGCGCA GGAAGACGCC TTGCTACGCA GCCAGCAACT GCTCAAGTGG
ACGGTGGAGG CATCCACCGA CACCATCTGG CAGTACGACG TGGTGCACGA CCGGTTCCTG
TGCAACAACA GGTGCCCCGG TCTGCTGGCG CTCTCCGACG CGGAAGATGA GTGCCACTGT
CGCCACAGGG CCGACCCGGC CGACGCGGAA CTGCTGCTGC ACAACCTGCG TAACGGGCAG
GGCGGGGACA AGGGTTTCAG CATGGAACTA CGCCTTCGCG ACGATGAAGG CGTGTGGCAC
TGGATGTATT GCCGTGGCAA GGTGGTGGAA TACGATGAGG AAGGCAGGCC CACGCTGGTC
GTGGGAGCCA ACACCGACAT CACGGAGCGC AAACGGTTCG AGACCGAATT GCGACAGGCC
CGCGATGATG CCGAAGCCGC CAACAAGGCC AAGAGCATCT TCCTCGCCAA CATGAGCCAC
GAGATTCGCA CTCCGCTGAA CGGCGTGCTG GGCATGCTCC AGCTTCTTGA GGACGCCCCG
CTCACTTCCG ACCAGCAGGA GTTGCTGCAT GTGGCAAGCC AGTCCAGCCG CAACCTGCTC
ACCGTCATCA ACGACATTCT CGACTTCACC CGCCTTGGTT CGGTGGCCCC CTCCTTCGCC
TCCGACCCCT TCGACGCAGC TGGCGCCCTG TACACCGTGC GCGACACCCT CGCCACGGGC
GCGAAGGACA AGGACATCCG GATTGAGACA GACATATCGC CCAATGTGCC CCCCCTGCTC
ATCGGCGATG TGACCCGCTT CAGGCAGATT CTCTTCAATC TTGTGGGCAA TGCGGTGAAA
TTCACCCAGC AGGGAACCGT GCGCATCTCG CTGCACGGTC TCGAACGGCA CAGCCCCGCC
GGGGCGTTGC GAATGCTGCT CATGGTGGAG GATTCGGGGA TAGGCATCCC GCAAGACATG
CTGGGCAACG TCTTCGAACC GTTCTTCCAG GTCGACGGCT CATACCGCCG CCGCTACCCC
GGTACCGGTC TGGGCCTTGG CATCGTCCGC AGCCTCGTGC ACGGCATGGG TGGCACCATC
GCCATCGACA GCGAAGAGGG GGCGGGTACG ACCATCGCCT GTACGCTCAT GTTCGGACGT
ATCGAGAAGA CGCCGGAAGG TGTGACAGAG GGATTCGAGA CCGGGGCGGG ACTGAAGGTG
CTTGTCGTCG AAGACGACCA CATCAGCAGG GTCGCCGCCA GCCGGATGCT CGAACGGCTG
GGACATTACC CCGTCGTGGC CTCATCGGCG GTGGAAGGCA TCGCCATGCT GCGACAGCAG
ACGTTCGACT GCGTCCTCAT GGACATCCAG ATGCCGGAGA TGGACGGCCT CGAACTGACT
GAAGCCCTGC GTTCGGGGCT CGTGCCGGGA GTGGAGGACA TCCCCGTGCT GGCGCTCACC
GCCCACGTTC TTACCGAGGA ACGGCGCGAC TTCATGAGTC GGGGGATTTC GGGCTATCTG
GCGAAGCCGC TGGAGATGGA CATCCTCGCC AAGGCGCTGA CGCAGATACC CCCCGGCGGC
AAGGGACACG CCGCCATCAT AGCAAGGGCC GACACATCGC CCATCTGA
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| Protein sequence | MEMRTPKNPG EGLAHQSLLR LAPGGPILGP VLSAIRIPAF TLDSDGLVVF MNDPFLDLVL
RPAADLLGKP LSVVVPAIHA PLVARAAADI LAGTCDDLLL PVSGQGGTAL PVRFRTVHAV
DAEGAPVCHA FATHALPRRH DESLRYAELF HLCPVPLWQQ DVTEAQQAID TLRTSGVHDL
RAYFEAHPHV LAEFARRIRI VDANETASGL FAGCREDLLD PDLFMRLGMR QFVMELLVML
ASGADRLSVE AACRALDGGE RALQIEARLM PGFGLTGMRV IACGTDITER NRSQAALADF
RNLVEAMSDN MIDMLWAKDT ECRYIFANRA IRENLLHSDD ERVLGRTDLH FAERQRRLGH
EHTFGELCID SDRVVLQTRT SGRFREDGKV QGRYLMLDVQ KSPLYDRQGK LLGTVGTGRD
ITLLKAQEDA LLRSQQLLKW TVEASTDTIW QYDVVHDRFL CNNRCPGLLA LSDAEDECHC
RHRADPADAE LLLHNLRNGQ GGDKGFSMEL RLRDDEGVWH WMYCRGKVVE YDEEGRPTLV
VGANTDITER KRFETELRQA RDDAEAANKA KSIFLANMSH EIRTPLNGVL GMLQLLEDAP
LTSDQQELLH VASQSSRNLL TVINDILDFT RLGSVAPSFA SDPFDAAGAL YTVRDTLATG
AKDKDIRIET DISPNVPPLL IGDVTRFRQI LFNLVGNAVK FTQQGTVRIS LHGLERHSPA
GALRMLLMVE DSGIGIPQDM LGNVFEPFFQ VDGSYRRRYP GTGLGLGIVR SLVHGMGGTI
AIDSEEGAGT TIACTLMFGR IEKTPEGVTE GFETGAGLKV LVVEDDHISR VAASRMLERL
GHYPVVASSA VEGIAMLRQQ TFDCVLMDIQ MPEMDGLELT EALRSGLVPG VEDIPVLALT
AHVLTEERRD FMSRGISGYL AKPLEMDILA KALTQIPPGG KGHAAIIARA DTSPI
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