| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0313 |
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| Symbol | |
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| ID | 4664369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 391833 |
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| End bp | 393563 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639818514 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_965763 |
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| Protein GI | 120601363 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACG GCGTGCCGGG GGCCGTTTCA GCTGTGGCCT CTGCCACACC GGGAACGGAG
TCCCTACCGT CACCCTTCGA CATCCTCGCC GACCATCTTG CCGACTGGGA ATGCTGGGAA
TCGCCCGAAG GACGGGTGCA TTTCGTAACA CCCGCCTGCC AGCGCATATC GGGTTTCGGC
ATCGACAACT TCCGCGCCCA CCATCTCTTC ATCGAAGGTC TCATCCACCC CGATGACCTG
CCGGCATGGC GCAGGCATCG CGAGATGCTC ACAGCCGGTC TGCCCAAGGC CGAAGTCGAA
ATCCGCATCC GCACGGCCGA AGGGGGCGAG AAGTGGCTTG CCGTCACCAG TCGCAACCTG
ACCGACGGCC ACGGTGAACC GCTAGGCATC CGTTCCAGCC TGCGCGACAT CACCGACCGC
AAGATGGTGC TCTCCCAGTT GCGGCATCAG GCGTGGCACG ACCCCCTCAC CGGGTTGCCC
AACCGTGCCC TGTGCCTCGA CCGCCTCGAC CGGGCACTCG GCAGGCTGGC GCGGGGCAAC
GGCGAACTCT GCGCCGTAGT GTTTCTCGAC CTCGACCGCT TCAAGCTGGT CAACGACACA
CTGGGCAACG CGGCTGGCGA CAGGGTGCTG CGCGAGACCG CCCGCAGACT GGGCACGGCG
ACCCGCAGCA CCGACACGGT CTCTCGCCTC GGCAGCGACG AGTTCATCAT CCTCATCGAA
GACCTGCGGG GAGAGGACGA GGCCCGCGCC ACCCTCGGCA GACTGCGCGA GGCGCAACGC
GCCCCCTTCG ACATCGACGG CAGGCATCTT CGGGTGACCG CCAGCATGGG CGTGGTGCTC
GCACGCGGCG GCAACGCCGA CGAGGTGCTG CGCAACGCCA ACATCGCCAT GCACCACGCC
AAGGAACATG GCGGCGACGC GGCGTCGTTC TTCCATGCCT CCATGCTCGA AGAGGCCCTC
GACCTGATGC AGCTCGAAAT CGACCTGCAC CGCGCCCTCG AGAATGACGA GTTCTTCCTC
GTGTACCAGC CCATCGTCTC GGTGGTCGAC CGGCGCATCA CCGGCTTCGA GGCACTGCTG
CGCTGGCGCC ACCCCGAACG TGGCGTCGTG GGGCCGGACG CCTTCATCGC GCTGGCAGAG
CACTCCGGGC TCATCCACCT GCTCGGGCGC AAGGCCCTTG ATGAGGCGTG CCGCACGCTC
GCCAAGTGGC GCAGGGTCGA CCAGCTGTTC GACGGCCTCA CCATGCACGT GAACCTCTCC
GCCCGACAGC TTTCGCAGAC CCACATCGTG GAACAGGTGG CAGAGGCCCT GCGCGACTCG
TGCCTGCCGC CGCACCTGCT CAAGCTTGAA GTGACCGAGA CCATGCTCAT GGAGAACCCC
GACTACGCCA ACGCTGTCCT CTGCCGCCTG CGCGACATCG GCGTGGGTGT CTGTGTCGAC
GACTTCGGCA CCGGGTACTC GTCTCTCAGC TACCTGCAAC GATTCCCCAT CGACACGCTC
AAGGTCGACC GCAGCTTCGT CAGCCGCATG ACGCGCGAAC CCGGTCAGTT CAAGATCGTG
CAGGCGGTCA TCGCGCTGGC GCACAGCCTC GGCCTTGAAG TGGTGGCCGA AGGCGTCGAG
GATGAAGAGC AGCGCATCAT GCTGCTGGGC CTCGCCTGCC GCTACGCACA GGGCTTCCTG
TTCGCGAAGC CGCTTGCCGC AGAGGACGTG CCCGCCCACG TGACAGGCTA G
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| Protein sequence | MPDGVPGAVS AVASATPGTE SLPSPFDILA DHLADWECWE SPEGRVHFVT PACQRISGFG
IDNFRAHHLF IEGLIHPDDL PAWRRHREML TAGLPKAEVE IRIRTAEGGE KWLAVTSRNL
TDGHGEPLGI RSSLRDITDR KMVLSQLRHQ AWHDPLTGLP NRALCLDRLD RALGRLARGN
GELCAVVFLD LDRFKLVNDT LGNAAGDRVL RETARRLGTA TRSTDTVSRL GSDEFIILIE
DLRGEDEARA TLGRLREAQR APFDIDGRHL RVTASMGVVL ARGGNADEVL RNANIAMHHA
KEHGGDAASF FHASMLEEAL DLMQLEIDLH RALENDEFFL VYQPIVSVVD RRITGFEALL
RWRHPERGVV GPDAFIALAE HSGLIHLLGR KALDEACRTL AKWRRVDQLF DGLTMHVNLS
ARQLSQTHIV EQVAEALRDS CLPPHLLKLE VTETMLMENP DYANAVLCRL RDIGVGVCVD
DFGTGYSSLS YLQRFPIDTL KVDRSFVSRM TREPGQFKIV QAVIALAHSL GLEVVAEGVE
DEEQRIMLLG LACRYAQGFL FAKPLAAEDV PAHVTG
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