Gene Dvul_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0281 
Symbol 
ID4664046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp351411 
End bp351830 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content59% 
IMG OID639818482 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_965731 
Protein GI120601331 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.149561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000106063 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTGCCT CTGTAGGCAA CAAGGGCGGC TTCGTCGCCG AAATCAACGT CACGCCCTTC 
GTGGACGTGA TGCTCGTTCT GCTCATCATC TTCATGGTCA CCGCGCCCAT GATGTCCGAA
GGACTCGAGG TGGACCTGCC GCAGACCCGT ACCGTCGAGG TACTGCCCAC CGACAGCGAT
CATCTCGTGC TCACCATCCG CAAGGACGGC GTGATGTACC TCGACGAATA CAAGGTCGTA
CCCGAAGAAC TCGAAGACTA CCTGCGTAGG CTCGTCAAGG AGAAGAACAA GACCCTCTTC
CTCCATGCGG ACAAGGACGT GCCCTACGGG GTCGTCGTTG ACGTCATGGG ACGCATCAAG
GGGGCTGGCA TCGAGAAGCT CGGCGTCGTG GCAGAGCGGG AAGACCCGAA GAAGAAATAG
 
Protein sequence
MGASVGNKGG FVAEINVTPF VDVMLVLLII FMVTAPMMSE GLEVDLPQTR TVEVLPTDSD 
HLVLTIRKDG VMYLDEYKVV PEELEDYLRR LVKEKNKTLF LHADKDVPYG VVVDVMGRIK
GAGIEKLGVV AEREDPKKK